Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AL135999.2-201ENST00000622438 1686 ntBASIC15.08■□□□□ 0
NR4A1P22736 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR4A1P22736 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
NR4A1P22736 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
NR4A1P22736 CDC14C-201ENST00000428251 1719 ntBASIC15.08■□□□□ 0
NR4A1P22736 LINC02447-202ENST00000501888 2146 ntBASIC15.08■□□□□ 0
NR4A1P22736 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
NR4A1P22736 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.08■□□□□ 0
NR4A1P22736 AC112504.1-201ENST00000623415 1841 ntBASIC15.08■□□□□ 0
NR4A1P22736 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
NR4A1P22736 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
NR4A1P22736 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.08■□□□□ 0
NR4A1P22736 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.08■□□□□ 0
NR4A1P22736 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NR4A1P22736 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NR4A1P22736 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.07■□□□□ 0
NR4A1P22736 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
NR4A1P22736 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 AC006486.2-201ENST00000624246 2199 ntBASIC15.07■□□□□ 0
NR4A1P22736 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.07■□□□□ 0
NR4A1P22736 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NR4A1P22736 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NR4A1P22736 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
NR4A1P22736 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 RPS2P28-201ENST00000314255 741 ntBASIC15.07■□□□□ 0
NR4A1P22736 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.07■□□□□ 0
NR4A1P22736 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.07■□□□□ 0
NR4A1P22736 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.07■□□□□ 0
NR4A1P22736 SIGLEC30P-201ENST00000455569 941 ntBASIC15.07■□□□□ 0
NR4A1P22736 AC018712.1-201ENST00000455767 687 ntBASIC15.07■□□□□ 0
NR4A1P22736 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.07■□□□□ 0
NR4A1P22736 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.07■□□□□ 0
NR4A1P22736 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.07■□□□□ 0
NR4A1P22736 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.07■□□□□ 0
NR4A1P22736 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.07■□□□□ 0
NR4A1P22736 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
NR4A1P22736 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.07■□□□□ 0
NR4A1P22736 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
NR4A1P22736 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
NR4A1P22736 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.07■□□□□ 0
NR4A1P22736 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 OR2I1P-210ENST00000642037 4691 ntBASIC15.07■□□□□ 0
NR4A1P22736 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
NR4A1P22736 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.07■□□□□ 0
NR4A1P22736 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.07■□□□□ 0
NR4A1P22736 AC009336.1-201ENST00000608941 1553 ntBASIC15.07■□□□□ 0
NR4A1P22736 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NR4A1P22736 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
NR4A1P22736 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NR4A1P22736 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
NR4A1P22736 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NR4A1P22736 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.06■□□□□ 0
NR4A1P22736 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
NR4A1P22736 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.06■□□□□ 0
NR4A1P22736 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.06■□□□□ 0
NR4A1P22736 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NR4A1P22736 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NR4A1P22736 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.06■□□□□ 0
NR4A1P22736 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NR4A1P22736 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.06■□□□□ 0
NR4A1P22736 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.06■□□□□ 0
NR4A1P22736 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.06■□□□□ 0
NR4A1P22736 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.06■□□□□ 0
NR4A1P22736 AC148477.8-201ENST00000624298 468 ntBASIC15.06■□□□□ 0
NR4A1P22736 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NR4A1P22736 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.06■□□□□ 0
NR4A1P22736 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.06■□□□□ 0
NR4A1P22736 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
NR4A1P22736 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.06■□□□□ 0
NR4A1P22736 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
NR4A1P22736 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms