Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.35■□□□□ 0.69
LMNB1P20700 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LMNB1P20700 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.35■□□□□ 0.69
LMNB1P20700 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LMNB1P20700 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LMNB1P20700 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LMNB1P20700 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.35■□□□□ 0.69
LMNB1P20700 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
LMNB1P20700 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LMNB1P20700 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LMNB1P20700 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.35■□□□□ 0.69
LMNB1P20700 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LMNB1P20700 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LMNB1P20700 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LMNB1P20700 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
LMNB1P20700 AGER-206ENST00000375070 1463 ntTSL 5 BASIC19.35■□□□□ 0.69
LMNB1P20700 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LMNB1P20700 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.34■□□□□ 0.69
LMNB1P20700 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMNB1P20700 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMNB1P20700 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMNB1P20700 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.34■□□□□ 0.69
LMNB1P20700 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMNB1P20700 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMNB1P20700 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LMNB1P20700 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC19.34■□□□□ 0.69
LMNB1P20700 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
LMNB1P20700 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LMNB1P20700 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMNB1P20700 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMNB1P20700 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
LMNB1P20700 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LMNB1P20700 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC19.34■□□□□ 0.69
LMNB1P20700 HNRNPA1P32-201ENST00000396326 963 ntBASIC19.34■□□□□ 0.69
LMNB1P20700 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.34■□□□□ 0.69
LMNB1P20700 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
LMNB1P20700 FAM197Y7-201ENST00000432892 766 ntBASIC19.34■□□□□ 0.69
LMNB1P20700 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LMNB1P20700 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.34■□□□□ 0.69
LMNB1P20700 RPSAP36-202ENST00000494591 1261 ntBASIC19.34■□□□□ 0.69
LMNB1P20700 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.34■□□□□ 0.69
LMNB1P20700 AC078819.1-201ENST00000547454 765 ntBASIC19.34■□□□□ 0.69
LMNB1P20700 AC012085.1-201ENST00000548270 765 ntBASIC19.34■□□□□ 0.69
LMNB1P20700 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
LMNB1P20700 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.34■□□□□ 0.69
LMNB1P20700 NAT9-222ENST00000583476 583 ntTSL 3 BASIC19.34■□□□□ 0.69
LMNB1P20700 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LMNB1P20700 AC138951.2-201ENST00000623455 1161 ntBASIC19.34■□□□□ 0.69
LMNB1P20700 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.34■□□□□ 0.69
LMNB1P20700 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMNB1P20700 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.34■□□□□ 0.69
LMNB1P20700 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMNB1P20700 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LMNB1P20700 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.34■□□□□ 0.69
LMNB1P20700 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LMNB1P20700 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LMNB1P20700 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
LMNB1P20700 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
LMNB1P20700 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
LMNB1P20700 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LMNB1P20700 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LMNB1P20700 LTB4R2-202ENST00000528054 3092 ntBASIC19.33■□□□□ 0.69
LMNB1P20700 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.33■□□□□ 0.69
LMNB1P20700 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
LMNB1P20700 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.33■□□□□ 0.68
LMNB1P20700 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMNB1P20700 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMNB1P20700 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LMNB1P20700 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.33■□□□□ 0.68
LMNB1P20700 KRT18P64-201ENST00000434946 1219 ntBASIC19.33■□□□□ 0.68
LMNB1P20700 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.33■□□□□ 0.68
LMNB1P20700 USP40-206ENST00000443711 628 ntTSL 2 BASIC19.33■□□□□ 0.68
LMNB1P20700 HOMER2P2-201ENST00000451621 847 ntBASIC19.33■□□□□ 0.68
LMNB1P20700 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
LMNB1P20700 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC19.33■□□□□ 0.68
LMNB1P20700 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC19.33■□□□□ 0.68
LMNB1P20700 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.33■□□□□ 0.68
LMNB1P20700 MIR5572-201ENST00000583188 137 ntBASIC19.33■□□□□ 0.68
LMNB1P20700 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC19.33■□□□□ 0.68
LMNB1P20700 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LMNB1P20700 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.33■□□□□ 0.68
LMNB1P20700 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LMNB1P20700 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
LMNB1P20700 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMNB1P20700 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMNB1P20700 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMNB1P20700 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LMNB1P20700 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LMNB1P20700 REXO1L8P-201ENST00000604378 1897 ntBASIC19.33■□□□□ 0.68
LMNB1P20700 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LMNB1P20700 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LMNB1P20700 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LMNB1P20700 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
LMNB1P20700 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMNB1P20700 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMNB1P20700 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMNB1P20700 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.32■□□□□ 0.68
LMNB1P20700 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LMNB1P20700 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
LMNB1P20700 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms