Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFRAP16234 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFRAP16234 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PDGFRAP16234 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.92■□□□□ 0.3
PDGFRAP16234 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PDGFRAP16234 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFRAP16234 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
PDGFRAP16234 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.92■□□□□ 0.3
PDGFRAP16234 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PDGFRAP16234 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PDGFRAP16234 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PDGFRAP16234 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.91■□□□□ 0.3
PDGFRAP16234 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.91■□□□□ 0.3
PDGFRAP16234 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
PDGFRAP16234 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.91■□□□□ 0.3
PDGFRAP16234 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFRAP16234 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PDGFRAP16234 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFRAP16234 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
PDGFRAP16234 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.91■□□□□ 0.3
PDGFRAP16234 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.91■□□□□ 0.3
PDGFRAP16234 GPS2P2-201ENST00000430745 888 ntBASIC16.91■□□□□ 0.3
PDGFRAP16234 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.91■□□□□ 0.3
PDGFRAP16234 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFRAP16234 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.91■□□□□ 0.3
PDGFRAP16234 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
PDGFRAP16234 AC106028.4-201ENST00000614509 607 ntBASIC16.91■□□□□ 0.3
PDGFRAP16234 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFRAP16234 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.91■□□□□ 0.3
PDGFRAP16234 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.91■□□□□ 0.3
PDGFRAP16234 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.91■□□□□ 0.3
PDGFRAP16234 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFRAP16234 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFRAP16234 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFRAP16234 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PDGFRAP16234 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFRAP16234 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.91■□□□□ 0.3
PDGFRAP16234 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFRAP16234 PRAL-201ENST00000624952 3286 ntBASIC16.91■□□□□ 0.3
PDGFRAP16234 AP001282.1-201ENST00000531301 1499 ntBASIC16.91■□□□□ 0.3
PDGFRAP16234 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.91■□□□□ 0.3
PDGFRAP16234 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.91■□□□□ 0.3
PDGFRAP16234 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
PDGFRAP16234 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFRAP16234 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.91■□□□□ 0.3
PDGFRAP16234 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PDGFRAP16234 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PDGFRAP16234 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.9■□□□□ 0.3
PDGFRAP16234 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 AC132872.4-202ENST00000622924 2756 ntBASIC16.9■□□□□ 0.3
PDGFRAP16234 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PDGFRAP16234 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PDGFRAP16234 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PDGFRAP16234 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 AC134407.2-201ENST00000625089 1978 ntBASIC16.9■□□□□ 0.3
PDGFRAP16234 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PDGFRAP16234 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PDGFRAP16234 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.9■□□□□ 0.3
PDGFRAP16234 AL645939.2-201ENST00000427340 991 ntBASIC16.9■□□□□ 0.3
PDGFRAP16234 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.9■□□□□ 0.3
PDGFRAP16234 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.9■□□□□ 0.3
PDGFRAP16234 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.9■□□□□ 0.3
PDGFRAP16234 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.9■□□□□ 0.3
PDGFRAP16234 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.9■□□□□ 0.3
PDGFRAP16234 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.9■□□□□ 0.3
PDGFRAP16234 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PDGFRAP16234 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.9■□□□□ 0.3
PDGFRAP16234 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
PDGFRAP16234 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.89■□□□□ 0.3
PDGFRAP16234 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PDGFRAP16234 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFRAP16234 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
PDGFRAP16234 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 AL691432.1-201ENST00000596308 1422 ntBASIC16.89■□□□□ 0.29
PDGFRAP16234 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.89■□□□□ 0.29
PDGFRAP16234 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PDGFRAP16234 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.89■□□□□ 0.29
PDGFRAP16234 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PDGFRAP16234 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms