Protein–RNA interactions for Protein: P13995

MTHFD2, Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2P13995 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFD2P13995 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.69■□□□□ 0.1
MTHFD2P13995 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFD2P13995 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.69■□□□□ 0.1
MTHFD2P13995 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFD2P13995 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFD2P13995 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFD2P13995 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFD2P13995 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MTHFD2P13995 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFD2P13995 RN7SL589P-201ENST00000481268 310 ntBASIC15.69■□□□□ 0.1
MTHFD2P13995 AC243562.2-201ENST00000561247 970 ntBASIC15.69■□□□□ 0.1
MTHFD2P13995 AC040169.1-201ENST00000565382 521 ntBASIC15.69■□□□□ 0.1
MTHFD2P13995 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.69■□□□□ 0.1
MTHFD2P13995 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFD2P13995 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.69■□□□□ 0.1
MTHFD2P13995 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.69■□□□□ 0.1
MTHFD2P13995 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
MTHFD2P13995 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFD2P13995 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFD2P13995 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFD2P13995 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFD2P13995 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.69■□□□□ 0.1
MTHFD2P13995 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFD2P13995 AC009090.5-201ENST00000624886 2285 ntBASIC15.69■□□□□ 0.1
MTHFD2P13995 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MTHFD2P13995 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
MTHFD2P13995 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.68■□□□□ 0.1
MTHFD2P13995 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.68■□□□□ 0.1
MTHFD2P13995 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFD2P13995 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.68■□□□□ 0.1
MTHFD2P13995 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.68■□□□□ 0.1
MTHFD2P13995 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MTHFD2P13995 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFD2P13995 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFD2P13995 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFD2P13995 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFD2P13995 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFD2P13995 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
MTHFD2P13995 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.68■□□□□ 0.1
MTHFD2P13995 REXO1L1P-202ENST00000608646 1974 ntBASIC15.68■□□□□ 0.1
MTHFD2P13995 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFD2P13995 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFD2P13995 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFD2P13995 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFD2P13995 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFD2P13995 RPS8P6-201ENST00000426177 609 ntBASIC15.68■□□□□ 0.1
MTHFD2P13995 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.68■□□□□ 0.1
MTHFD2P13995 AC079140.1-201ENST00000508039 487 ntBASIC15.68■□□□□ 0.1
MTHFD2P13995 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.68■□□□□ 0.1
MTHFD2P13995 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.68■□□□□ 0.1
MTHFD2P13995 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.68■□□□□ 0.1
MTHFD2P13995 AC026120.1-201ENST00000611536 926 ntBASIC15.68■□□□□ 0.1
MTHFD2P13995 AC084121.4-201ENST00000641598 221 ntBASIC15.68■□□□□ 0.1
MTHFD2P13995 AF228730.8-201ENST00000642140 221 ntBASIC15.68■□□□□ 0.1
MTHFD2P13995 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
MTHFD2P13995 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFD2P13995 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.68■□□□□ 0.1
MTHFD2P13995 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
MTHFD2P13995 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
MTHFD2P13995 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFD2P13995 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.68■□□□□ 0.1
MTHFD2P13995 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.68■□□□□ 0.1
MTHFD2P13995 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.68■□□□□ 0.1
MTHFD2P13995 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFD2P13995 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MTHFD2P13995 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.67■□□□□ 0.1
MTHFD2P13995 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
MTHFD2P13995 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.67■□□□□ 0.1
MTHFD2P13995 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.67■□□□□ 0.1
MTHFD2P13995 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MTHFD2P13995 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.67■□□□□ 0.1
MTHFD2P13995 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.67■□□□□ 0.1
MTHFD2P13995 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
MTHFD2P13995 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.67■□□□□ 0.1
MTHFD2P13995 MIR574-201ENST00000385209 96 ntBASIC15.67■□□□□ 0.1
MTHFD2P13995 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.67■□□□□ 0.1
MTHFD2P13995 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.67■□□□□ 0.1
MTHFD2P13995 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.67■□□□□ 0.1
MTHFD2P13995 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.67■□□□□ 0.1
MTHFD2P13995 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.67■□□□□ 0.1
MTHFD2P13995 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.67■□□□□ 0.1
MTHFD2P13995 MIR4313-201ENST00000580760 101 ntBASIC15.67■□□□□ 0.1
MTHFD2P13995 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.67■□□□□ 0.1
MTHFD2P13995 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
MTHFD2P13995 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
MTHFD2P13995 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.67■□□□□ 0.1
MTHFD2P13995 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
MTHFD2P13995 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms