Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DOBP13765 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
HLA-DOBP13765 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DOBP13765 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DOBP13765 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
HLA-DOBP13765 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DOBP13765 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.47□□□□□ -0.09
HLA-DOBP13765 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DOBP13765 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DOBP13765 KRT8P23-201ENST00000560090 1207 ntBASIC14.47□□□□□ -0.09
HLA-DOBP13765 MIR3687-2-201ENST00000577708 61 ntBASIC14.47□□□□□ -0.09
HLA-DOBP13765 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DOBP13765 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DOBP13765 MIR3687-1-201ENST00000614492 61 ntBASIC14.47□□□□□ -0.09
HLA-DOBP13765 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DOBP13765 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 AP005117.1-202ENST00000581724 1908 ntBASIC14.47□□□□□ -0.09
HLA-DOBP13765 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DOBP13765 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DOBP13765 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DOBP13765 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DOBP13765 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DOBP13765 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DOBP13765 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DOBP13765 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DOBP13765 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DOBP13765 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DOBP13765 AC134407.2-201ENST00000625089 1978 ntBASIC14.46□□□□□ -0.09
HLA-DOBP13765 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DOBP13765 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DOBP13765 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DOBP13765 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 AC004461.1-201ENST00000412461 403 ntBASIC14.46□□□□□ -0.09
HLA-DOBP13765 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DOBP13765 AC245100.5-201ENST00000452108 331 ntBASIC14.46□□□□□ -0.09
HLA-DOBP13765 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DOBP13765 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 RNA5SP410-201ENST00000516285 106 ntBASIC14.46□□□□□ -0.09
HLA-DOBP13765 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 AL513210.1-201ENST00000629608 234 ntBASIC14.46□□□□□ -0.09
HLA-DOBP13765 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DOBP13765 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DOBP13765 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DOBP13765 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DOBP13765 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.46□□□□□ -0.1
HLA-DOBP13765 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DOBP13765 HYMAI-201ENST00000635591 3347 ntBASIC14.46□□□□□ -0.1
HLA-DOBP13765 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
HLA-DOBP13765 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.46□□□□□ -0.1
HLA-DOBP13765 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
HLA-DOBP13765 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
HLA-DOBP13765 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.46□□□□□ -0.1
HLA-DOBP13765 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
HLA-DOBP13765 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
HLA-DOBP13765 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms