Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL5A2P05997 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
COL5A2P05997 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
COL5A2P05997 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
COL5A2P05997 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.77■□□□□ 0.92
COL5A2P05997 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC20.77■□□□□ 0.92
COL5A2P05997 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC20.77■□□□□ 0.92
COL5A2P05997 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC20.77■□□□□ 0.91
COL5A2P05997 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
COL5A2P05997 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
COL5A2P05997 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.77■□□□□ 0.91
COL5A2P05997 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
COL5A2P05997 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
COL5A2P05997 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
COL5A2P05997 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL5A2P05997 POLL-217ENST00000628479 1953 ntTSL 5 BASIC20.76■□□□□ 0.91
COL5A2P05997 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL5A2P05997 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
COL5A2P05997 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL5A2P05997 GGCT-203ENST00000409144 836 ntTSL 2 BASIC20.76■□□□□ 0.91
COL5A2P05997 HINT2P1-201ENST00000419438 481 ntBASIC20.76■□□□□ 0.91
COL5A2P05997 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC20.76■□□□□ 0.91
COL5A2P05997 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL5A2P05997 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC20.76■□□□□ 0.91
COL5A2P05997 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL5A2P05997 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC20.76■□□□□ 0.91
COL5A2P05997 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.76■□□□□ 0.91
COL5A2P05997 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
COL5A2P05997 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC20.76■□□□□ 0.91
COL5A2P05997 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL5A2P05997 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL5A2P05997 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL5A2P05997 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL5A2P05997 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
COL5A2P05997 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC20.76■□□□□ 0.91
COL5A2P05997 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL5A2P05997 AL023775.1-201ENST00000454907 1746 ntBASIC20.76■□□□□ 0.91
COL5A2P05997 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
COL5A2P05997 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
COL5A2P05997 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC20.76■□□□□ 0.91
COL5A2P05997 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL5A2P05997 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
COL5A2P05997 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC20.75■□□□□ 0.91
COL5A2P05997 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC20.75■□□□□ 0.91
COL5A2P05997 POM121L10P-201ENST00000436994 1285 ntBASIC20.75■□□□□ 0.91
COL5A2P05997 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC20.75■□□□□ 0.91
COL5A2P05997 RERG-205ENST00000537647 935 ntTSL 2 BASIC20.75■□□□□ 0.91
COL5A2P05997 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC20.75■□□□□ 0.91
COL5A2P05997 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC20.75■□□□□ 0.91
COL5A2P05997 UBL5-208ENST00000593087 320 ntTSL 3 BASIC20.75■□□□□ 0.91
COL5A2P05997 AC091812.3-201ENST00000621362 345 ntBASIC20.75■□□□□ 0.91
COL5A2P05997 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
COL5A2P05997 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 AC018892.3-201ENST00000623986 2499 ntBASIC20.75■□□□□ 0.91
COL5A2P05997 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.75■□□□□ 0.91
COL5A2P05997 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.75■□□□□ 0.91
COL5A2P05997 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.75■□□□□ 0.91
COL5A2P05997 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC20.75■□□□□ 0.91
COL5A2P05997 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
COL5A2P05997 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC20.75■□□□□ 0.91
COL5A2P05997 NDUFV2P1-201ENST00000596415 907 ntBASIC20.75■□□□□ 0.91
COL5A2P05997 HCG18-245ENST00000602550 559 ntTSL 4 BASIC20.75■□□□□ 0.91
COL5A2P05997 SNX1-214ENST00000625244 324 ntTSL 5 BASIC20.75■□□□□ 0.91
COL5A2P05997 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC20.75■□□□□ 0.91
COL5A2P05997 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL5A2P05997 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
COL5A2P05997 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL5A2P05997 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COL5A2P05997 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL5A2P05997 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
COL5A2P05997 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COL5A2P05997 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL5A2P05997 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL5A2P05997 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL5A2P05997 AL354989.2-201ENST00000435838 1540 ntBASIC20.74■□□□□ 0.91
COL5A2P05997 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL5A2P05997 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL5A2P05997 AL138799.1-201ENST00000448213 1675 ntBASIC20.74■□□□□ 0.91
COL5A2P05997 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL5A2P05997 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.74■□□□□ 0.91
COL5A2P05997 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL5A2P05997 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC20.74■□□□□ 0.91
COL5A2P05997 PTPA-218ENST00000435132 618 ntTSL 2 BASIC20.74■□□□□ 0.91
COL5A2P05997 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC20.74■□□□□ 0.91
COL5A2P05997 IMP3P2-201ENST00000489760 475 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms