Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HMGN1P05114 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
HMGN1P05114 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HMGN1P05114 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
HMGN1P05114 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
HMGN1P05114 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGN1P05114 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HMGN1P05114 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGN1P05114 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.64□□□□□ -0.07
HMGN1P05114 RPS2P28-201ENST00000314255 741 ntBASIC14.64□□□□□ -0.07
HMGN1P05114 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGN1P05114 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
HMGN1P05114 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGN1P05114 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGN1P05114 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.64□□□□□ -0.07
HMGN1P05114 CLEC4GP1-201ENST00000596555 870 ntBASIC14.64□□□□□ -0.07
HMGN1P05114 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.64□□□□□ -0.07
HMGN1P05114 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
HMGN1P05114 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 AC006486.2-201ENST00000624246 2199 ntBASIC14.64□□□□□ -0.07
HMGN1P05114 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.64□□□□□ -0.07
HMGN1P05114 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
HMGN1P05114 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
HMGN1P05114 AC097376.2-205ENST00000610159 5334 ntBASIC14.63□□□□□ -0.07
HMGN1P05114 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGN1P05114 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGN1P05114 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGN1P05114 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGN1P05114 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
HMGN1P05114 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.63□□□□□ -0.07
HMGN1P05114 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
HMGN1P05114 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HMGN1P05114 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
HMGN1P05114 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGN1P05114 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.63□□□□□ -0.07
HMGN1P05114 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGN1P05114 UPK3BP1-201ENST00000428678 509 ntBASIC14.63□□□□□ -0.07
HMGN1P05114 PRSS29P-201ENST00000440800 595 ntBASIC14.63□□□□□ -0.07
HMGN1P05114 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.63□□□□□ -0.07
HMGN1P05114 AC108073.2-201ENST00000464002 357 ntBASIC14.63□□□□□ -0.07
HMGN1P05114 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.63□□□□□ -0.07
HMGN1P05114 KRT18P34-201ENST00000488218 1270 ntBASIC14.63□□□□□ -0.07
HMGN1P05114 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGN1P05114 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC14.63□□□□□ -0.07
HMGN1P05114 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGN1P05114 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.63□□□□□ -0.07
HMGN1P05114 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
HMGN1P05114 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.63□□□□□ -0.07
HMGN1P05114 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.63□□□□□ -0.07
HMGN1P05114 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 OR2I1P-210ENST00000642037 4691 ntBASIC14.63□□□□□ -0.07
HMGN1P05114 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
HMGN1P05114 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
HMGN1P05114 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGN1P05114 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.63□□□□□ -0.07
HMGN1P05114 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
HMGN1P05114 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
HMGN1P05114 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
HMGN1P05114 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms