Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
APOC1P02654 NMU-203ENST00000507338 658 ntTSL 3 BASIC14.34□□□□□ -0.11
APOC1P02654 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.34□□□□□ -0.11
APOC1P02654 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.34□□□□□ -0.11
APOC1P02654 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.34□□□□□ -0.11
APOC1P02654 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.34□□□□□ -0.11
APOC1P02654 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APOC1P02654 Z83851.2-201ENST00000609564 659 ntBASIC14.34□□□□□ -0.11
APOC1P02654 CICP13-201ENST00000422015 2789 ntBASIC14.34□□□□□ -0.11
APOC1P02654 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.34□□□□□ -0.11
APOC1P02654 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.34□□□□□ -0.11
APOC1P02654 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
APOC1P02654 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APOC1P02654 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.34□□□□□ -0.11
APOC1P02654 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.34□□□□□ -0.11
APOC1P02654 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.34□□□□□ -0.11
APOC1P02654 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.34□□□□□ -0.11
APOC1P02654 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
APOC1P02654 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
APOC1P02654 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
APOC1P02654 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.34□□□□□ -0.11
APOC1P02654 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
APOC1P02654 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOC1P02654 FAM45BP-202ENST00000592932 1624 ntBASIC14.33□□□□□ -0.11
APOC1P02654 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.11
APOC1P02654 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOC1P02654 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOC1P02654 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOC1P02654 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOC1P02654 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
APOC1P02654 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOC1P02654 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOC1P02654 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOC1P02654 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.33□□□□□ -0.11
APOC1P02654 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.33□□□□□ -0.11
APOC1P02654 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
APOC1P02654 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.33□□□□□ -0.11
APOC1P02654 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.33□□□□□ -0.11
APOC1P02654 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.33□□□□□ -0.12
APOC1P02654 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
APOC1P02654 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.33□□□□□ -0.12
APOC1P02654 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC1P02654 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC1P02654 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
APOC1P02654 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOC1P02654 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOC1P02654 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
APOC1P02654 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC1P02654 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.33□□□□□ -0.12
APOC1P02654 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC14.33□□□□□ -0.12
APOC1P02654 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.33□□□□□ -0.12
APOC1P02654 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.33□□□□□ -0.12
APOC1P02654 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.33□□□□□ -0.12
APOC1P02654 AL049840.3-201ENST00000602669 611 ntBASIC14.33□□□□□ -0.12
APOC1P02654 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.33□□□□□ -0.12
APOC1P02654 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
APOC1P02654 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
APOC1P02654 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC1P02654 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
APOC1P02654 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.33□□□□□ -0.12
APOC1P02654 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC1P02654 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOC1P02654 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC1P02654 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
APOC1P02654 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.33□□□□□ -0.12
APOC1P02654 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC1P02654 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOC1P02654 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.32□□□□□ -0.12
APOC1P02654 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.32□□□□□ -0.12
APOC1P02654 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.32□□□□□ -0.12
APOC1P02654 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
APOC1P02654 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 AL365203.3-201ENST00000609742 2057 ntBASIC14.32□□□□□ -0.12
APOC1P02654 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.32□□□□□ -0.12
APOC1P02654 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOC1P02654 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.32□□□□□ -0.12
APOC1P02654 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms