Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT6AP02538 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.68■□□□□ 0.1
KRT6AP02538 AC002347.1-201ENST00000569543 541 ntBASIC15.68■□□□□ 0.1
KRT6AP02538 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.68■□□□□ 0.1
KRT6AP02538 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
KRT6AP02538 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.68■□□□□ 0.1
KRT6AP02538 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.68■□□□□ 0.1
KRT6AP02538 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.68■□□□□ 0.1
KRT6AP02538 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
KRT6AP02538 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6AP02538 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.68■□□□□ 0.1
KRT6AP02538 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6AP02538 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6AP02538 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6AP02538 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6AP02538 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6AP02538 AC099063.4-201ENST00000641099 1602 ntBASIC15.68■□□□□ 0.1
KRT6AP02538 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6AP02538 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
KRT6AP02538 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
KRT6AP02538 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
KRT6AP02538 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT6AP02538 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6AP02538 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6AP02538 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6AP02538 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6AP02538 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6AP02538 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
KRT6AP02538 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6AP02538 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6AP02538 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6AP02538 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.67■□□□□ 0.1
KRT6AP02538 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6AP02538 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT6AP02538 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6AP02538 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
KRT6AP02538 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.67■□□□□ 0.1
KRT6AP02538 KRT18P2-201ENST00000447938 1258 ntBASIC15.67■□□□□ 0.1
KRT6AP02538 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.67■□□□□ 0.1
KRT6AP02538 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT6AP02538 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.67■□□□□ 0.1
KRT6AP02538 AC112191.1-201ENST00000523689 701 ntBASIC15.67■□□□□ 0.1
KRT6AP02538 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.67■□□□□ 0.1
KRT6AP02538 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.67■□□□□ 0.1
KRT6AP02538 PDPK2P-202ENST00000562415 1191 ntBASIC15.67■□□□□ 0.1
KRT6AP02538 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.67■□□□□ 0.1
KRT6AP02538 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6AP02538 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6AP02538 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT6AP02538 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
KRT6AP02538 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.67■□□□□ 0.1
KRT6AP02538 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT6AP02538 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT6AP02538 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.67■□□□□ 0.1
KRT6AP02538 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.67■□□□□ 0.1
KRT6AP02538 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6AP02538 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT6AP02538 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.67■□□□□ 0.1
KRT6AP02538 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6AP02538 IL9RP2-201ENST00000423948 1312 ntBASIC15.67■□□□□ 0.1
KRT6AP02538 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
KRT6AP02538 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.66■□□□□ 0.1
KRT6AP02538 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT6AP02538 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
KRT6AP02538 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT6AP02538 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT6AP02538 RNA5SP416-201ENST00000516838 111 ntBASIC15.66■□□□□ 0.1
KRT6AP02538 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.66■□□□□ 0.1
KRT6AP02538 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.66■□□□□ 0.1
KRT6AP02538 MIR4321-201ENST00000592276 80 ntBASIC15.66■□□□□ 0.1
KRT6AP02538 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.66■□□□□ 0.1
KRT6AP02538 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.66■□□□□ 0.1
KRT6AP02538 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.66■□□□□ 0.1
KRT6AP02538 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
KRT6AP02538 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
KRT6AP02538 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.66■□□□□ 0.1
KRT6AP02538 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.66■□□□□ 0.1
KRT6AP02538 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
KRT6AP02538 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms