Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD4O95243 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MBD4O95243 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD4O95243 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.15■□□□□ 0.66
MBD4O95243 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.15■□□□□ 0.66
MBD4O95243 AC114501.2-201ENST00000439631 535 ntBASIC19.15■□□□□ 0.66
MBD4O95243 SDHAP3-202ENST00000515467 728 ntBASIC19.15■□□□□ 0.66
MBD4O95243 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
MBD4O95243 AC004461.2-201ENST00000629517 803 ntBASIC19.15■□□□□ 0.66
MBD4O95243 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MBD4O95243 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD4O95243 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
MBD4O95243 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MBD4O95243 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.15■□□□□ 0.66
MBD4O95243 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD4O95243 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
MBD4O95243 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD4O95243 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MBD4O95243 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
MBD4O95243 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD4O95243 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
MBD4O95243 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
MBD4O95243 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
MBD4O95243 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.66
MBD4O95243 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
MBD4O95243 AC018892.3-201ENST00000623986 2499 ntBASIC19.14■□□□□ 0.66
MBD4O95243 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.14■□□□□ 0.65
MBD4O95243 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD4O95243 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD4O95243 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
MBD4O95243 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD4O95243 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD4O95243 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD4O95243 AL035633.1-201ENST00000406139 838 ntBASIC19.14■□□□□ 0.65
MBD4O95243 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.14■□□□□ 0.65
MBD4O95243 RASL12-203ENST00000434605 982 ntTSL 2 BASIC19.14■□□□□ 0.65
MBD4O95243 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC19.14■□□□□ 0.65
MBD4O95243 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
MBD4O95243 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.14■□□□□ 0.65
MBD4O95243 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD4O95243 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
MBD4O95243 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD4O95243 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.14■□□□□ 0.65
MBD4O95243 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD4O95243 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD4O95243 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC19.14■□□□□ 0.65
MBD4O95243 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MBD4O95243 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC19.14■□□□□ 0.65
MBD4O95243 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC19.14■□□□□ 0.65
MBD4O95243 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MBD4O95243 AC069224.1-201ENST00000566372 1715 ntBASIC19.14■□□□□ 0.65
MBD4O95243 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC19.13■□□□□ 0.65
MBD4O95243 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
MBD4O95243 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD4O95243 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD4O95243 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
MBD4O95243 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
MBD4O95243 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.13■□□□□ 0.65
MBD4O95243 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC19.13■□□□□ 0.65
MBD4O95243 GNAQP1-201ENST00000444815 1067 ntBASIC19.13■□□□□ 0.65
MBD4O95243 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC19.13■□□□□ 0.65
MBD4O95243 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.13■□□□□ 0.65
MBD4O95243 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.13■□□□□ 0.65
MBD4O95243 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.13■□□□□ 0.65
MBD4O95243 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.13■□□□□ 0.65
MBD4O95243 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.13■□□□□ 0.65
MBD4O95243 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MBD4O95243 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MBD4O95243 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.13■□□□□ 0.65
MBD4O95243 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.13■□□□□ 0.65
MBD4O95243 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.13■□□□□ 0.65
MBD4O95243 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MBD4O95243 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.13■□□□□ 0.65
MBD4O95243 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MBD4O95243 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.13■□□□□ 0.65
MBD4O95243 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD4O95243 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD4O95243 AC124067.4-201ENST00000519691 2379 ntBASIC19.12■□□□□ 0.65
MBD4O95243 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.12■□□□□ 0.65
MBD4O95243 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.12■□□□□ 0.65
MBD4O95243 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.12■□□□□ 0.65
MBD4O95243 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC19.12■□□□□ 0.65
MBD4O95243 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD4O95243 GRN-214ENST00000589265 1632 ntTSL 5 BASIC19.12■□□□□ 0.65
MBD4O95243 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD4O95243 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD4O95243 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
MBD4O95243 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MBD4O95243 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD4O95243 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.12■□□□□ 0.65
MBD4O95243 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.12■□□□□ 0.65
MBD4O95243 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.12■□□□□ 0.65
MBD4O95243 AL589987.1-201ENST00000453380 819 ntBASIC19.12■□□□□ 0.65
MBD4O95243 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
MBD4O95243 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MBD4O95243 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MBD4O95243 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
MBD4O95243 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.12■□□□□ 0.65
MBD4O95243 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MBD4O95243 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms