Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
ALX3O95076 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ALX3O95076 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ALX3O95076 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.35□□□□□ -0.11
ALX3O95076 TSPY19P-201ENST00000418461 509 ntBASIC14.35□□□□□ -0.11
ALX3O95076 HCG4-201ENST00000418983 998 ntBASIC14.35□□□□□ -0.11
ALX3O95076 TSPY18P-201ENST00000441642 509 ntBASIC14.35□□□□□ -0.11
ALX3O95076 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ALX3O95076 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.35□□□□□ -0.11
ALX3O95076 KRT18P31-201ENST00000506277 1292 ntBASIC14.35□□□□□ -0.11
ALX3O95076 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ALX3O95076 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ALX3O95076 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.35□□□□□ -0.11
ALX3O95076 SART3-203ENST00000546611 1184 ntBASIC14.35□□□□□ -0.11
ALX3O95076 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.35□□□□□ -0.11
ALX3O95076 AC005412.3-201ENST00000580309 715 ntBASIC14.35□□□□□ -0.11
ALX3O95076 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
ALX3O95076 AC006557.2-201ENST00000592985 1240 ntBASIC14.35□□□□□ -0.11
ALX3O95076 AL732292.2-201ENST00000609649 430 ntBASIC14.35□□□□□ -0.11
ALX3O95076 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
ALX3O95076 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ALX3O95076 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.35□□□□□ -0.11
ALX3O95076 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.35□□□□□ -0.11
ALX3O95076 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ALX3O95076 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ALX3O95076 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ALX3O95076 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ALX3O95076 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ALX3O95076 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ALX3O95076 AC129492.6-201ENST00000611383 1305 ntBASIC14.35□□□□□ -0.11
ALX3O95076 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ALX3O95076 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ALX3O95076 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.35□□□□□ -0.11
ALX3O95076 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ALX3O95076 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ALX3O95076 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ALX3O95076 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.35□□□□□ -0.11
ALX3O95076 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.34□□□□□ -0.11
ALX3O95076 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ALX3O95076 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.34□□□□□ -0.11
ALX3O95076 GPAA1P2-202ENST00000606848 1787 ntBASIC14.34□□□□□ -0.11
ALX3O95076 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.34□□□□□ -0.11
ALX3O95076 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.34□□□□□ -0.11
ALX3O95076 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.34□□□□□ -0.11
ALX3O95076 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.34□□□□□ -0.11
ALX3O95076 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.34□□□□□ -0.11
ALX3O95076 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ALX3O95076 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.34□□□□□ -0.11
ALX3O95076 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.34□□□□□ -0.11
ALX3O95076 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.34□□□□□ -0.11
ALX3O95076 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ALX3O95076 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 LAGE3P1-201ENST00000425356 484 ntBASIC14.34□□□□□ -0.11
ALX3O95076 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.34□□□□□ -0.11
ALX3O95076 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ALX3O95076 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 AC087641.1-201ENST00000557561 1021 ntBASIC14.34□□□□□ -0.11
ALX3O95076 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.34□□□□□ -0.11
ALX3O95076 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.34□□□□□ -0.11
ALX3O95076 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 CYP2A7P1-201ENST00000595391 815 ntBASIC14.34□□□□□ -0.11
ALX3O95076 AC008608.2-201ENST00000606089 416 ntBASIC14.34□□□□□ -0.11
ALX3O95076 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.34□□□□□ -0.11
ALX3O95076 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 AC244517.3-201ENST00000616254 1235 ntBASIC14.34□□□□□ -0.11
ALX3O95076 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.34□□□□□ -0.11
ALX3O95076 REXO1L6P-202ENST00000619970 1078 ntBASIC14.34□□□□□ -0.11
ALX3O95076 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
ALX3O95076 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ALX3O95076 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ALX3O95076 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
ALX3O95076 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.34□□□□□ -0.11
ALX3O95076 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ALX3O95076 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ALX3O95076 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ALX3O95076 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ALX3O95076 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.11
ALX3O95076 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.33□□□□□ -0.11
ALX3O95076 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ALX3O95076 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
ALX3O95076 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ALX3O95076 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.33□□□□□ -0.11
ALX3O95076 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ALX3O95076 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
ALX3O95076 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.33□□□□□ -0.11
ALX3O95076 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ALX3O95076 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms