Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
USH2AO75445 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
USH2AO75445 AC242376.1-201ENST00000559033 726 ntBASIC7.03□□□□□ -1.28
USH2AO75445 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC7.03□□□□□ -1.28
USH2AO75445 AL162426.1-201ENST00000624141 743 ntBASIC7.03□□□□□ -1.28
USH2AO75445 AL805961.1-203ENST00000641078 1258 ntBASIC7.03□□□□□ -1.28
USH2AO75445 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
USH2AO75445 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC7.03□□□□□ -1.28
USH2AO75445 AL512652.2-201ENST00000625156 1716 ntBASIC7.03□□□□□ -1.28
USH2AO75445 AC092171.3-201ENST00000610122 2651 ntBASIC7.03□□□□□ -1.28
USH2AO75445 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC7.02□□□□□ -1.28
USH2AO75445 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC7.02□□□□□ -1.28
USH2AO75445 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
USH2AO75445 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
USH2AO75445 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
USH2AO75445 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
USH2AO75445 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC7.02□□□□□ -1.29
USH2AO75445 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC7.02□□□□□ -1.29
USH2AO75445 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
USH2AO75445 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
USH2AO75445 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
USH2AO75445 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
USH2AO75445 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC7.02□□□□□ -1.29
USH2AO75445 AC074138.1-201ENST00000611182 1303 ntBASIC7.02□□□□□ -1.29
USH2AO75445 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC7.02□□□□□ -1.29
USH2AO75445 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC7.02□□□□□ -1.29
USH2AO75445 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 TMCO5B-205ENST00000530020 894 ntBASIC7.02□□□□□ -1.29
USH2AO75445 AC013355.1-201ENST00000562625 723 ntBASIC7.02□□□□□ -1.29
USH2AO75445 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 AL139339.2-201ENST00000608063 657 ntBASIC7.02□□□□□ -1.29
USH2AO75445 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC7.02□□□□□ -1.29
USH2AO75445 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC7.02□□□□□ -1.29
USH2AO75445 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
USH2AO75445 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
USH2AO75445 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
USH2AO75445 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC7.02□□□□□ -1.29
USH2AO75445 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC7.02□□□□□ -1.29
USH2AO75445 COMP-202ENST00000425807 2292 ntTSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC7.02□□□□□ -1.29
USH2AO75445 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC7.02□□□□□ -1.29
USH2AO75445 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
USH2AO75445 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC7.02□□□□□ -1.29
USH2AO75445 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
USH2AO75445 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
USH2AO75445 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC7.02□□□□□ -1.29
USH2AO75445 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
USH2AO75445 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC7.02□□□□□ -1.29
USH2AO75445 AC051619.9-201ENST00000623237 597 ntBASIC7.02□□□□□ -1.29
USH2AO75445 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
USH2AO75445 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC7.01□□□□□ -1.29
USH2AO75445 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC7.01□□□□□ -1.29
USH2AO75445 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
USH2AO75445 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
USH2AO75445 RPS9P1-201ENST00000419943 583 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms