Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
SCN2BO60939 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SCN2BO60939 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.3■□□□□ 0.04
SCN2BO60939 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCN2BO60939 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.3■□□□□ 0.04
SCN2BO60939 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.3■□□□□ 0.04
SCN2BO60939 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SCN2BO60939 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCN2BO60939 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCN2BO60939 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCN2BO60939 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.3■□□□□ 0.04
SCN2BO60939 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCN2BO60939 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCN2BO60939 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCN2BO60939 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCN2BO60939 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
SCN2BO60939 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SCN2BO60939 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.3■□□□□ 0.04
SCN2BO60939 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCN2BO60939 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.3■□□□□ 0.04
SCN2BO60939 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCN2BO60939 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCN2BO60939 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SCN2BO60939 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.3■□□□□ 0.04
SCN2BO60939 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.3■□□□□ 0.04
SCN2BO60939 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.3■□□□□ 0.04
SCN2BO60939 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.3■□□□□ 0.04
SCN2BO60939 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.3■□□□□ 0.04
SCN2BO60939 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.3■□□□□ 0.04
SCN2BO60939 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.3■□□□□ 0.04
SCN2BO60939 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCN2BO60939 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.3■□□□□ 0.04
SCN2BO60939 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.3■□□□□ 0.04
SCN2BO60939 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCN2BO60939 AC092850.2-201ENST00000623821 2697 ntBASIC15.3■□□□□ 0.04
SCN2BO60939 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.3■□□□□ 0.04
SCN2BO60939 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
SCN2BO60939 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SCN2BO60939 AP003680.1-201ENST00000598970 3660 ntBASIC15.3■□□□□ 0.04
SCN2BO60939 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.3■□□□□ 0.04
SCN2BO60939 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCN2BO60939 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
SCN2BO60939 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SCN2BO60939 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SCN2BO60939 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SCN2BO60939 AC136621.1-201ENST00000624017 2304 ntBASIC15.29■□□□□ 0.04
SCN2BO60939 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
SCN2BO60939 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SCN2BO60939 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SCN2BO60939 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.29■□□□□ 0.04
SCN2BO60939 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 AC067930.6-201ENST00000623257 4947 ntBASIC15.29■□□□□ 0.04
SCN2BO60939 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.29■□□□□ 0.04
SCN2BO60939 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SCN2BO60939 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.29■□□□□ 0.04
SCN2BO60939 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.29■□□□□ 0.04
SCN2BO60939 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.29■□□□□ 0.04
SCN2BO60939 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.29■□□□□ 0.04
SCN2BO60939 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.29■□□□□ 0.04
SCN2BO60939 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.29■□□□□ 0.04
SCN2BO60939 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.29■□□□□ 0.04
SCN2BO60939 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.29■□□□□ 0.04
SCN2BO60939 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.29■□□□□ 0.04
SCN2BO60939 AP002472.1-201ENST00000577490 586 ntBASIC15.29■□□□□ 0.04
SCN2BO60939 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.29■□□□□ 0.04
SCN2BO60939 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.29■□□□□ 0.04
SCN2BO60939 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.29■□□□□ 0.04
SCN2BO60939 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.29■□□□□ 0.04
SCN2BO60939 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SCN2BO60939 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.29■□□□□ 0.04
SCN2BO60939 MIR600HG-201ENST00000449175 5984 ntBASIC15.29■□□□□ 0.04
SCN2BO60939 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.29■□□□□ 0.04
SCN2BO60939 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SCN2BO60939 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.29■□□□□ 0.04
SCN2BO60939 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.29■□□□□ 0.04
SCN2BO60939 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SCN2BO60939 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.29■□□□□ 0.04
SCN2BO60939 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms