Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GFRA3O60609 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC15.42■□□□□ 0.06
GFRA3O60609 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.42■□□□□ 0.06
GFRA3O60609 EIF2S2P5-201ENST00000457635 968 ntBASIC15.42■□□□□ 0.06
GFRA3O60609 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.42■□□□□ 0.06
GFRA3O60609 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.42■□□□□ 0.06
GFRA3O60609 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.42■□□□□ 0.06
GFRA3O60609 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.42■□□□□ 0.06
GFRA3O60609 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.42■□□□□ 0.06
GFRA3O60609 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GFRA3O60609 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
GFRA3O60609 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GFRA3O60609 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GFRA3O60609 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GFRA3O60609 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC15.42■□□□□ 0.06
GFRA3O60609 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GFRA3O60609 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.42■□□□□ 0.06
GFRA3O60609 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.41■□□□□ 0.06
GFRA3O60609 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
GFRA3O60609 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 AC104581.1-202ENST00000635932 2618 ntBASIC15.41■□□□□ 0.06
GFRA3O60609 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
GFRA3O60609 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
GFRA3O60609 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.41■□□□□ 0.06
GFRA3O60609 CMC1-204ENST00000423894 549 ntTSL 2 BASIC15.41■□□□□ 0.06
GFRA3O60609 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC15.41■□□□□ 0.06
GFRA3O60609 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 AC026410.3-201ENST00000514280 936 ntBASIC15.41■□□□□ 0.06
GFRA3O60609 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.41■□□□□ 0.06
GFRA3O60609 DNM1P51-201ENST00000558149 522 ntBASIC15.41■□□□□ 0.06
GFRA3O60609 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 AC015910.1-201ENST00000579400 975 ntBASIC15.41■□□□□ 0.06
GFRA3O60609 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC15.41■□□□□ 0.06
GFRA3O60609 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC15.41■□□□□ 0.06
GFRA3O60609 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
GFRA3O60609 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 AL805961.1-203ENST00000641078 1258 ntBASIC15.41■□□□□ 0.06
GFRA3O60609 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.41■□□□□ 0.06
GFRA3O60609 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GFRA3O60609 AC009113.1-201ENST00000570267 2443 ntBASIC15.41■□□□□ 0.06
GFRA3O60609 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
GFRA3O60609 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFRA3O60609 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.4■□□□□ 0.06
GFRA3O60609 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.4■□□□□ 0.06
GFRA3O60609 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
GFRA3O60609 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFRA3O60609 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFRA3O60609 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.4■□□□□ 0.06
GFRA3O60609 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
GFRA3O60609 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.4■□□□□ 0.06
GFRA3O60609 KRT18P64-201ENST00000434946 1219 ntBASIC15.4■□□□□ 0.06
GFRA3O60609 PIN4P1-201ENST00000451079 396 ntBASIC15.4■□□□□ 0.06
GFRA3O60609 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC15.4■□□□□ 0.06
GFRA3O60609 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.4■□□□□ 0.06
GFRA3O60609 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.4■□□□□ 0.06
GFRA3O60609 RTN3P1-201ENST00000536295 711 ntBASIC15.4■□□□□ 0.06
GFRA3O60609 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GFRA3O60609 RBM8B-201ENST00000555532 525 ntBASIC15.4■□□□□ 0.06
GFRA3O60609 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.4■□□□□ 0.06
GFRA3O60609 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
GFRA3O60609 AC005730.2-201ENST00000564549 1184 ntBASIC15.4■□□□□ 0.06
GFRA3O60609 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.4■□□□□ 0.06
GFRA3O60609 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC15.4■□□□□ 0.06
GFRA3O60609 ETV2-207ENST00000619399 994 ntTSL 5 BASIC15.4■□□□□ 0.06
GFRA3O60609 FO393412.1-201ENST00000619841 382 ntBASIC15.4■□□□□ 0.06
GFRA3O60609 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.4■□□□□ 0.06
GFRA3O60609 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.4■□□□□ 0.06
GFRA3O60609 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.4■□□□□ 0.06
GFRA3O60609 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFRA3O60609 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFRA3O60609 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFRA3O60609 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFRA3O60609 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GFRA3O60609 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.4■□□□□ 0.06
GFRA3O60609 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.4■□□□□ 0.06
GFRA3O60609 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.4■□□□□ 0.06
GFRA3O60609 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GFRA3O60609 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GFRA3O60609 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GFRA3O60609 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.39■□□□□ 0.05
GFRA3O60609 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GFRA3O60609 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
GFRA3O60609 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.39■□□□□ 0.05
GFRA3O60609 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.39■□□□□ 0.05
GFRA3O60609 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GFRA3O60609 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms