Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
ARHGEF9O43307 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF9O43307 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF9O43307 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF9O43307 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
ARHGEF9O43307 AC144831.1-201ENST00000573312 2656 ntBASIC15.07■□□□□ 0
ARHGEF9O43307 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ARHGEF9O43307 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF9O43307 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF9O43307 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ARHGEF9O43307 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.07■□□□□ 0
ARHGEF9O43307 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
ARHGEF9O43307 PAWRP1-201ENST00000451083 565 ntBASIC15.07■□□□□ 0
ARHGEF9O43307 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.07■□□□□ 0
ARHGEF9O43307 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.07■□□□□ 0
ARHGEF9O43307 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.07■□□□□ 0
ARHGEF9O43307 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.07■□□□□ 0
ARHGEF9O43307 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.07■□□□□ 0
ARHGEF9O43307 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF9O43307 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
ARHGEF9O43307 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF9O43307 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
ARHGEF9O43307 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.07■□□□□ 0
ARHGEF9O43307 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
ARHGEF9O43307 TOP3BP1-201ENST00000420768 1380 ntBASIC15.07■□□□□ 0
ARHGEF9O43307 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF9O43307 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF9O43307 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
ARHGEF9O43307 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.07■□□□□ 0
ARHGEF9O43307 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF9O43307 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF9O43307 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
ARHGEF9O43307 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.07■□□□□ 0
ARHGEF9O43307 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.07■□□□□ 0
ARHGEF9O43307 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
ARHGEF9O43307 AC126177.1-201ENST00000547829 2218 ntBASIC15.07■□□□□ 0
ARHGEF9O43307 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
ARHGEF9O43307 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.06■□□□□ 0
ARHGEF9O43307 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.06■□□□□ 0
ARHGEF9O43307 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.06■□□□□ 0
ARHGEF9O43307 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.06■□□□□ 0
ARHGEF9O43307 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.06■□□□□ 0
ARHGEF9O43307 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
ARHGEF9O43307 METTL21AP1-201ENST00000438852 635 ntBASIC15.06■□□□□ 0
ARHGEF9O43307 AC009947.1-201ENST00000444350 727 ntBASIC15.06■□□□□ 0
ARHGEF9O43307 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.06■□□□□ 0
ARHGEF9O43307 HLA-J-202ENST00000469281 1241 ntBASIC15.06■□□□□ 0
ARHGEF9O43307 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.06■□□□□ 0
ARHGEF9O43307 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.06■□□□□ 0
ARHGEF9O43307 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
ARHGEF9O43307 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.06■□□□□ 0
ARHGEF9O43307 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.06■□□□□ 0
ARHGEF9O43307 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.06■□□□□ 0
ARHGEF9O43307 AC013467.2-201ENST00000605472 835 ntBASIC15.06■□□□□ 0
ARHGEF9O43307 AL596442.2-201ENST00000610240 980 ntBASIC15.06■□□□□ 0
ARHGEF9O43307 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
ARHGEF9O43307 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.06■□□□□ 0
ARHGEF9O43307 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.06■□□□□ 0
ARHGEF9O43307 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
ARHGEF9O43307 AC006504.4-201ENST00000592118 1568 ntBASIC15.06■□□□□ 0
ARHGEF9O43307 FAM45BP-202ENST00000592932 1624 ntBASIC15.06■□□□□ 0
ARHGEF9O43307 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.06■□□□□ 0
ARHGEF9O43307 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ARHGEF9O43307 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.05■□□□□ 0
ARHGEF9O43307 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.05■□□□□ 0
ARHGEF9O43307 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ARHGEF9O43307 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC15.05■□□□□ 0
ARHGEF9O43307 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.05■□□□□ 0
ARHGEF9O43307 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ARHGEF9O43307 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
ARHGEF9O43307 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.05■□□□□ 0
ARHGEF9O43307 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
ARHGEF9O43307 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.05■□□□□ -0
ARHGEF9O43307 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ARHGEF9O43307 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
ARHGEF9O43307 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
ARHGEF9O43307 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.05■□□□□ -0
ARHGEF9O43307 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.05■□□□□ -0
ARHGEF9O43307 ELK2BP-201ENST00000415014 1224 ntBASIC15.05■□□□□ -0
ARHGEF9O43307 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms