Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SLC28A1O00337 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A1O00337 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC28A1O00337 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A1O00337 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC28A1O00337 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A1O00337 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC28A1O00337 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC28A1O00337 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC28A1O00337 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC28A1O00337 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A1O00337 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
SLC28A1O00337 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A1O00337 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A1O00337 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SLC28A1O00337 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC28A1O00337 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A1O00337 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A1O00337 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A1O00337 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A1O00337 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A1O00337 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A1O00337 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.54■□□□□ 0.08
SLC28A1O00337 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.54■□□□□ 0.08
SLC28A1O00337 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SLC28A1O00337 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SLC28A1O00337 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC28A1O00337 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC28A1O00337 KRT18P2-201ENST00000447938 1258 ntBASIC15.54■□□□□ 0.08
SLC28A1O00337 AC009078.2-202ENST00000463353 338 ntBASIC15.54■□□□□ 0.08
SLC28A1O00337 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
SLC28A1O00337 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.54■□□□□ 0.08
SLC28A1O00337 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
SLC28A1O00337 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.54■□□□□ 0.08
SLC28A1O00337 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SLC28A1O00337 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.54■□□□□ 0.08
SLC28A1O00337 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SLC28A1O00337 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.54■□□□□ 0.08
SLC28A1O00337 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC28A1O00337 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.54■□□□□ 0.08
SLC28A1O00337 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SLC28A1O00337 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SLC28A1O00337 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A1O00337 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SLC28A1O00337 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SLC28A1O00337 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
SLC28A1O00337 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A1O00337 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SLC28A1O00337 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC28A1O00337 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A1O00337 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SLC28A1O00337 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A1O00337 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SLC28A1O00337 AC007967.2-201ENST00000432613 625 ntBASIC15.53■□□□□ 0.08
SLC28A1O00337 AC112191.1-201ENST00000523689 701 ntBASIC15.53■□□□□ 0.08
SLC28A1O00337 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.53■□□□□ 0.08
SLC28A1O00337 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A1O00337 AP002472.1-201ENST00000577490 586 ntBASIC15.53■□□□□ 0.08
SLC28A1O00337 AC024267.1-201ENST00000582320 895 ntBASIC15.53■□□□□ 0.08
SLC28A1O00337 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A1O00337 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A1O00337 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SLC28A1O00337 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SLC28A1O00337 TMBIM7P-203ENST00000641617 1718 ntBASIC15.53■□□□□ 0.08
SLC28A1O00337 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC28A1O00337 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
SLC28A1O00337 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.53■□□□□ 0.08
SLC28A1O00337 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SLC28A1O00337 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A1O00337 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SLC28A1O00337 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SLC28A1O00337 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
SLC28A1O00337 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.53■□□□□ 0.08
SLC28A1O00337 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms