Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
TLR4O00206 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.95■□□□□ 0.14
TLR4O00206 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.95■□□□□ 0.14
TLR4O00206 U91328.1-201ENST00000437528 223 ntBASIC15.95■□□□□ 0.14
TLR4O00206 ATP5G2P4-201ENST00000442175 420 ntBASIC15.95■□□□□ 0.14
TLR4O00206 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 GIMAP3P-201ENST00000495150 836 ntBASIC15.95■□□□□ 0.14
TLR4O00206 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.95■□□□□ 0.14
TLR4O00206 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.95■□□□□ 0.14
TLR4O00206 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 AC055876.2-201ENST00000531834 546 ntBASIC15.95■□□□□ 0.14
TLR4O00206 TPRX2P-201ENST00000535362 881 ntBASIC15.95■□□□□ 0.14
TLR4O00206 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.95■□□□□ 0.14
TLR4O00206 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.95■□□□□ 0.14
TLR4O00206 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC15.95■□□□□ 0.14
TLR4O00206 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.95■□□□□ 0.14
TLR4O00206 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.95■□□□□ 0.14
TLR4O00206 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
TLR4O00206 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.95■□□□□ 0.14
TLR4O00206 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
TLR4O00206 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TLR4O00206 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TLR4O00206 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.95■□□□□ 0.14
TLR4O00206 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
TLR4O00206 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.95■□□□□ 0.14
TLR4O00206 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TLR4O00206 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TLR4O00206 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TLR4O00206 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TLR4O00206 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.94■□□□□ 0.14
TLR4O00206 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TLR4O00206 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TLR4O00206 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TLR4O00206 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TLR4O00206 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TLR4O00206 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.94■□□□□ 0.14
TLR4O00206 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TLR4O00206 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TLR4O00206 AL512384.1-201ENST00000406683 331 ntBASIC15.94■□□□□ 0.14
TLR4O00206 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.94■□□□□ 0.14
TLR4O00206 ARSEP1-201ENST00000420443 635 ntBASIC15.94■□□□□ 0.14
TLR4O00206 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.94■□□□□ 0.14
TLR4O00206 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.94■□□□□ 0.14
TLR4O00206 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.94■□□□□ 0.14
TLR4O00206 GPR53P-205ENST00000457298 1084 ntBASIC15.94■□□□□ 0.14
TLR4O00206 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.94■□□□□ 0.14
TLR4O00206 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.94■□□□□ 0.14
TLR4O00206 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.94■□□□□ 0.14
TLR4O00206 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TLR4O00206 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.94■□□□□ 0.14
TLR4O00206 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TLR4O00206 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.94■□□□□ 0.14
TLR4O00206 AL365330.1-201ENST00000607459 531 ntBASIC15.94■□□□□ 0.14
TLR4O00206 AC007431.3-201ENST00000623221 587 ntBASIC15.94■□□□□ 0.14
TLR4O00206 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.94■□□□□ 0.14
TLR4O00206 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TLR4O00206 U82695.1-201ENST00000635752 1889 ntBASIC15.94■□□□□ 0.14
TLR4O00206 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TLR4O00206 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TLR4O00206 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.94■□□□□ 0.14
TLR4O00206 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TLR4O00206 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TLR4O00206 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TLR4O00206 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TLR4O00206 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TLR4O00206 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.94■□□□□ 0.14
TLR4O00206 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
TLR4O00206 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TLR4O00206 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TLR4O00206 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC15.93■□□□□ 0.14
TLR4O00206 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TLR4O00206 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.93■□□□□ 0.14
TLR4O00206 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TLR4O00206 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TLR4O00206 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TLR4O00206 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.93■□□□□ 0.14
TLR4O00206 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TLR4O00206 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TLR4O00206 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TLR4O00206 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TLR4O00206 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TLR4O00206 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TLR4O00206 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TLR4O00206 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TLR4O00206 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms