Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 AL662844.4-201ENST00000606367 2838 ntBASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 AC093724.1-201ENST00000448659 1027 ntBASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 AC004233.3-201ENST00000607794 1269 ntBASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 AC009118.2-201ENST00000613275 655 ntBASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 MIR600HG-201ENST00000449175 5984 ntBASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.69□□□□□ -0.06
NPIPA3F8WFD2 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 RPL37AP1-201ENST00000412502 279 ntBASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 AC005034.1-201ENST00000426657 489 ntBASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 AC024267.1-201ENST00000582320 895 ntBASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 TEX28P1-201ENST00000613479 1221 ntBASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 TEX28P2-201ENST00000617764 1221 ntBASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 AC005622.1-201ENST00000636801 1703 ntBASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NPIPA3F8WFD2 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NPIPA3F8WFD2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms