Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 AL162274.1-201ENST00000617191 1098 ntBASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 Z97205.2-201ENST00000564697 1639 ntBASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 AC092171.3-201ENST00000610122 2651 ntBASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TBC1D3BA6NDS4 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 CLK3P2-201ENST00000427566 1453 ntBASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 TTTY23B-201ENST00000442790 549 ntBASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 TMEM261P1-201ENST00000604899 340 ntBASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 AC017083.2-201ENST00000608069 979 ntBASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.29■□□□□ 0.2
TBC1D3BA6NDS4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 ALOX12P2-203ENST00000570921 1945 ntBASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 AZGP1P1-201ENST00000411909 902 ntBASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 LINC01115-203ENST00000606068 577 ntBASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TBC1D3BA6NDS4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 223.9 ms