Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 EEF1DP4-201ENST00000446006 880 ntBASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 TMEM198B-204ENST00000484016 896 ntBASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 RPSAP36-202ENST00000494591 1261 ntBASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 MIR3619-201ENST00000579667 83 ntBASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 AC138951.2-201ENST00000623455 1161 ntBASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.99■□□□□ 0.47
PTCH2Q9Y6C5 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 AC004987.2-201ENST00000395959 1148 ntBASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 IMP3P2-201ENST00000489760 475 ntBASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 REXO1L8P-201ENST00000604378 1897 ntBASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 AC005622.1-201ENST00000636801 1703 ntBASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 AL691432.1-201ENST00000596308 1422 ntBASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.98■□□□□ 0.47
PTCH2Q9Y6C5 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.97■□□□□ 0.47
PTCH2Q9Y6C5 HOMER2P2-201ENST00000451621 847 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms