Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 PCED1CP-201ENST00000419887 785 ntBASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 FAM86EP-206ENST00000510506 987 ntBASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 AC083849.1-201ENST00000615227 514 ntBASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 HYMAI.1-201ENST00000620949 238 ntBASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.41■□□□□ 0.06
LRCH1Q9Y2L9 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 IER3-202ENST00000376377 1350 ntBASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 HBZP1-201ENST00000354915 429 ntBASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 MTCL1P1-201ENST00000446207 792 ntBASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 AC090616.6-203ENST00000579186 1945 ntBASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 AC008677.1-201ENST00000519230 1561 ntBASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 C18orf15-201ENST00000623680 2534 ntBASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 PCGF3-213ENST00000620529 1899 ntBASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRCH1Q9Y2L9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 SNX33P1-201ENST00000592116 1762 ntBASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.39■□□□□ 0.05
LRCH1Q9Y2L9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms