Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC14.45□□□□□ -0.1
COPS3Q9UNS2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
COPS3Q9UNS2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.45□□□□□ -0.1
COPS3Q9UNS2 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COPS3Q9UNS2 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.45□□□□□ -0.1
COPS3Q9UNS2 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COPS3Q9UNS2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.45□□□□□ -0.1
COPS3Q9UNS2 AC117500.6-201ENST00000624871 588 ntBASIC14.45□□□□□ -0.1
COPS3Q9UNS2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.45□□□□□ -0.1
COPS3Q9UNS2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COPS3Q9UNS2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.45□□□□□ -0.1
COPS3Q9UNS2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COPS3Q9UNS2 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COPS3Q9UNS2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
COPS3Q9UNS2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.45□□□□□ -0.1
COPS3Q9UNS2 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COPS3Q9UNS2 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.45□□□□□ -0.1
COPS3Q9UNS2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
COPS3Q9UNS2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 AC136621.1-201ENST00000624017 2304 ntBASIC14.44□□□□□ -0.1
COPS3Q9UNS2 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 SSR4P1-203ENST00000599569 2260 ntBASIC14.44□□□□□ -0.1
COPS3Q9UNS2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 FAM197Y8-203ENST00000450145 560 ntBASIC14.44□□□□□ -0.1
COPS3Q9UNS2 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 CXCL1P1-201ENST00000502804 216 ntBASIC14.44□□□□□ -0.1
COPS3Q9UNS2 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 AC148477.8-201ENST00000624298 468 ntBASIC14.44□□□□□ -0.1
COPS3Q9UNS2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COPS3Q9UNS2 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 MIR3909-201ENST00000579518 119 ntBASIC14.43□□□□□ -0.1
COPS3Q9UNS2 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COPS3Q9UNS2 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms