Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 AC018665.1-201ENST00000622927 1362 ntBASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HOXC10Q9NYD6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 AC005052.1-201ENST00000625181 2492 ntBASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 AC012313.1-201ENST00000593393 3059 ntBASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 AC136604.1-201ENST00000418535 575 ntBASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 SNX29P1-201ENST00000548357 1007 ntBASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 AL022328.1-201ENST00000610050 478 ntBASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 AC106886.4-201ENST00000623557 2502 ntBASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 AC005332.8-201ENST00000622750 2735 ntBASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HOXC10Q9NYD6 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC10Q9NYD6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
HOXC10Q9NYD6 ALOX12P2-203ENST00000570921 1945 ntBASIC18.29■□□□□ 0.52
HOXC10Q9NYD6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HOXC10Q9NYD6 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC10Q9NYD6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC10Q9NYD6 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HOXC10Q9NYD6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HOXC10Q9NYD6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.29■□□□□ 0.52
HOXC10Q9NYD6 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HOXC10Q9NYD6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms