Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 AC011477.6-201ENST00000604980 1927 ntBASIC15.55■□□□□ 0.08
LRTM1Q9HBL6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 AC007967.2-201ENST00000432613 625 ntBASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 AC068137.2-201ENST00000605408 478 ntBASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LRTM1Q9HBL6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRTM1Q9HBL6 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 AP001282.1-201ENST00000531301 1499 ntBASIC15.52■□□□□ 0.08
LRTM1Q9HBL6 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms