Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSBP4Q9BWG4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.27□□□□□ -0.44
SSBP4Q9BWG4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSBP4Q9BWG4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSBP4Q9BWG4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC12.27□□□□□ -0.44
SSBP4Q9BWG4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSBP4Q9BWG4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.27□□□□□ -0.44
SSBP4Q9BWG4 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSBP4Q9BWG4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSBP4Q9BWG4 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSBP4Q9BWG4 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SSBP4Q9BWG4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SSBP4Q9BWG4 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 AC005521.1-201ENST00000393351 872 ntBASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 AC010740.1-201ENST00000417035 684 ntBASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 LINC00982-205ENST00000420957 435 ntBASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 AL671277.2-201ENST00000458060 996 ntBASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 AC091607.1-201ENST00000490318 1060 ntBASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 AC063952.2-201ENST00000498792 1227 ntBASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 RN7SL121P-201ENST00000584223 273 ntBASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.27□□□□□ -0.45
SSBP4Q9BWG4 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 AL512652.2-201ENST00000625156 1716 ntBASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 AC020658.6-201ENST00000623564 1870 ntBASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 AL136038.3-201ENST00000561909 1096 ntBASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 AP005901.3-202ENST00000581653 237 ntBASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 AC073592.4-201ENST00000623827 446 ntBASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 TOP3BP1-201ENST00000420768 1380 ntBASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 AC243591.1-201ENST00000452967 1364 ntBASIC12.26□□□□□ -0.45
SSBP4Q9BWG4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.26□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms