Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCA3Q99758 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCA3Q99758 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
ABCA3Q99758 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCA3Q99758 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC20.92■□□□□ 0.94
ABCA3Q99758 CD8B2-202ENST00000417670 633 ntBASIC20.92■□□□□ 0.94
ABCA3Q99758 HIST2H2BB-201ENST00000449108 381 ntBASIC20.92■□□□□ 0.94
ABCA3Q99758 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC20.92■□□□□ 0.94
ABCA3Q99758 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
ABCA3Q99758 MIR3907-201ENST00000579424 151 ntBASIC20.92■□□□□ 0.94
ABCA3Q99758 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC20.92■□□□□ 0.94
ABCA3Q99758 AC139713.2-201ENST00000641328 2723 ntBASIC20.92■□□□□ 0.94
ABCA3Q99758 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
ABCA3Q99758 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.92■□□□□ 0.94
ABCA3Q99758 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCA3Q99758 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.92■□□□□ 0.94
ABCA3Q99758 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC20.92■□□□□ 0.94
ABCA3Q99758 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
ABCA3Q99758 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ABCA3Q99758 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ABCA3Q99758 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCA3Q99758 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCA3Q99758 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
ABCA3Q99758 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCA3Q99758 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ABCA3Q99758 LBH-202ENST00000401506 485 ntTSL 3 BASIC20.92■□□□□ 0.94
ABCA3Q99758 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ABCA3Q99758 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
ABCA3Q99758 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
ABCA3Q99758 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC20.92■□□□□ 0.94
ABCA3Q99758 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC20.92■□□□□ 0.94
ABCA3Q99758 AC116345.2-201ENST00000512837 523 ntBASIC20.92■□□□□ 0.94
ABCA3Q99758 RN7SL48P-201ENST00000579283 293 ntBASIC20.92■□□□□ 0.94
ABCA3Q99758 AC026740.1-201ENST00000607068 791 ntBASIC20.92■□□□□ 0.94
ABCA3Q99758 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ABCA3Q99758 LRRFIP1P1-201ENST00000498774 2246 ntBASIC20.91■□□□□ 0.94
ABCA3Q99758 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ABCA3Q99758 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ABCA3Q99758 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCA3Q99758 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC20.91■□□□□ 0.94
ABCA3Q99758 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ABCA3Q99758 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCA3Q99758 AL355334.1-201ENST00000417713 215 ntBASIC20.91■□□□□ 0.94
ABCA3Q99758 RGS5-214ENST00000429865 754 ntTSL 3 BASIC20.91■□□□□ 0.94
ABCA3Q99758 AC008267.1-201ENST00000474858 1069 ntBASIC20.91■□□□□ 0.94
ABCA3Q99758 AL391280.1-201ENST00000506969 1062 ntBASIC20.91■□□□□ 0.94
ABCA3Q99758 PRKXP1-201ENST00000561423 1122 ntBASIC20.91■□□□□ 0.94
ABCA3Q99758 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC20.91■□□□□ 0.94
ABCA3Q99758 POLL-217ENST00000628479 1953 ntTSL 5 BASIC20.91■□□□□ 0.94
ABCA3Q99758 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCA3Q99758 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ABCA3Q99758 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.91■□□□□ 0.94
ABCA3Q99758 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC20.9■□□□□ 0.94
ABCA3Q99758 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC20.9■□□□□ 0.94
ABCA3Q99758 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 RN7SL181P-201ENST00000462921 277 ntBASIC20.9■□□□□ 0.94
ABCA3Q99758 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC20.9■□□□□ 0.94
ABCA3Q99758 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC20.9■□□□□ 0.94
ABCA3Q99758 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC20.9■□□□□ 0.94
ABCA3Q99758 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC20.9■□□□□ 0.94
ABCA3Q99758 BX539320.1-201ENST00000623759 877 ntBASIC20.9■□□□□ 0.94
ABCA3Q99758 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC20.9■□□□□ 0.94
ABCA3Q99758 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 UBALD1-205ENST00000590891 2641 ntBASIC20.9■□□□□ 0.94
ABCA3Q99758 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ABCA3Q99758 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.9■□□□□ 0.94
ABCA3Q99758 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
ABCA3Q99758 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
ABCA3Q99758 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 AC069218.1-201ENST00000435269 762 ntBASIC20.9■□□□□ 0.94
ABCA3Q99758 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ABCA3Q99758 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC20.9■□□□□ 0.94
ABCA3Q99758 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC20.9■□□□□ 0.94
ABCA3Q99758 RN7SL555P-201ENST00000584742 339 ntBASIC20.9■□□□□ 0.94
ABCA3Q99758 AC007663.3-201ENST00000609632 465 ntBASIC20.9■□□□□ 0.94
ABCA3Q99758 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
ABCA3Q99758 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
ABCA3Q99758 YRDCP1-201ENST00000621419 643 ntBASIC20.9■□□□□ 0.94
ABCA3Q99758 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
ABCA3Q99758 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ABCA3Q99758 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ABCA3Q99758 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC20.89■□□□□ 0.93
ABCA3Q99758 AC022188.1-201ENST00000620960 1664 ntBASIC20.89■□□□□ 0.93
ABCA3Q99758 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.89■□□□□ 0.93
ABCA3Q99758 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms