Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 DRD5P1-201ENST00000456605 1438 ntBASIC16.57■□□□□ 0.24
CDCA3Q99618 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CDCA3Q99618 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 BTBD6P1-201ENST00000412176 1267 ntBASIC16.57■□□□□ 0.24
CDCA3Q99618 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 KRT18P25-201ENST00000508931 1278 ntBASIC16.57■□□□□ 0.24
CDCA3Q99618 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 AC015910.1-201ENST00000579400 975 ntBASIC16.57■□□□□ 0.24
CDCA3Q99618 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC16.57■□□□□ 0.24
CDCA3Q99618 AP005019.2-201ENST00000615104 511 ntBASIC16.57■□□□□ 0.24
CDCA3Q99618 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.57■□□□□ 0.24
CDCA3Q99618 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CDCA3Q99618 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
CDCA3Q99618 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.57■□□□□ 0.24
CDCA3Q99618 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CDCA3Q99618 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CDCA3Q99618 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDCA3Q99618 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.56■□□□□ 0.24
CDCA3Q99618 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CDCA3Q99618 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA3Q99618 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA3Q99618 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.56■□□□□ 0.24
CDCA3Q99618 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CDCA3Q99618 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA3Q99618 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA3Q99618 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA3Q99618 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA3Q99618 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.56■□□□□ 0.24
CDCA3Q99618 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA3Q99618 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA3Q99618 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.56■□□□□ 0.24
CDCA3Q99618 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.56■□□□□ 0.24
CDCA3Q99618 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.56■□□□□ 0.24
CDCA3Q99618 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.56■□□□□ 0.24
CDCA3Q99618 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.56■□□□□ 0.24
CDCA3Q99618 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.56■□□□□ 0.24
CDCA3Q99618 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.56■□□□□ 0.24
CDCA3Q99618 AC132938.4-201ENST00000623835 848 ntBASIC16.56■□□□□ 0.24
CDCA3Q99618 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA3Q99618 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CDCA3Q99618 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.56■□□□□ 0.24
CDCA3Q99618 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA3Q99618 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.56■□□□□ 0.24
CDCA3Q99618 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA3Q99618 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA3Q99618 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA3Q99618 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA3Q99618 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CDCA3Q99618 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA3Q99618 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.56■□□□□ 0.24
CDCA3Q99618 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.56■□□□□ 0.24
CDCA3Q99618 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CDCA3Q99618 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CDCA3Q99618 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA3Q99618 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA3Q99618 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA3Q99618 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA3Q99618 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA3Q99618 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.55■□□□□ 0.24
CDCA3Q99618 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDCA3Q99618 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA3Q99618 REXO1L1P-202ENST00000608646 1974 ntBASIC16.55■□□□□ 0.24
CDCA3Q99618 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
CDCA3Q99618 HLA-A-202ENST00000376806 1854 ntBASIC16.55■□□□□ 0.24
CDCA3Q99618 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.55■□□□□ 0.24
CDCA3Q99618 AHCYP2-201ENST00000430630 1300 ntBASIC16.55■□□□□ 0.24
CDCA3Q99618 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.55■□□□□ 0.24
CDCA3Q99618 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA3Q99618 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA3Q99618 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA3Q99618 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.55■□□□□ 0.24
CDCA3Q99618 AC104306.2-201ENST00000451877 341 ntBASIC16.55■□□□□ 0.24
CDCA3Q99618 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA3Q99618 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
CDCA3Q99618 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.55■□□□□ 0.24
CDCA3Q99618 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.55■□□□□ 0.24
CDCA3Q99618 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.55■□□□□ 0.24
CDCA3Q99618 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.55■□□□□ 0.24
CDCA3Q99618 RN7SL190P-201ENST00000582519 257 ntBASIC16.55■□□□□ 0.24
CDCA3Q99618 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA3Q99618 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA3Q99618 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.55■□□□□ 0.24
CDCA3Q99618 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.55■□□□□ 0.24
CDCA3Q99618 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.55■□□□□ 0.24
CDCA3Q99618 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDCA3Q99618 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA3Q99618 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA3Q99618 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDCA3Q99618 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.55■□□□□ 0.24
CDCA3Q99618 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CDCA3Q99618 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms