Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLCC1Q96S66 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.69□□□□□ -0.22
CLCC1Q96S66 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC13.69□□□□□ -0.22
CLCC1Q96S66 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CLCC1Q96S66 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.68□□□□□ -0.22
CLCC1Q96S66 NABP1-203ENST00000409510 843 ntTSL 5 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 HLA-J-202ENST00000469281 1241 ntBASIC13.68□□□□□ -0.22
CLCC1Q96S66 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.68□□□□□ -0.22
CLCC1Q96S66 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLCC1Q96S66 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC13.68□□□□□ -0.22
CLCC1Q96S66 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 AC013268.4-201ENST00000637413 2228 ntBASIC13.67□□□□□ -0.22
CLCC1Q96S66 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 DUSP5P1-201ENST00000441325 1139 ntBASIC13.67□□□□□ -0.22
CLCC1Q96S66 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.67□□□□□ -0.22
CLCC1Q96S66 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.67□□□□□ -0.22
CLCC1Q96S66 AL359258.3-201ENST00000622910 2331 ntBASIC13.67□□□□□ -0.22
CLCC1Q96S66 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLCC1Q96S66 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms