Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.15□□□□□ -0.3
RAB40CQ96S21 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
RAB40CQ96S21 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RAB40CQ96S21 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
RAB40CQ96S21 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.15□□□□□ -0.31
RAB40CQ96S21 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
RAB40CQ96S21 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RAB40CQ96S21 AP005117.1-201ENST00000584346 1413 ntBASIC13.14□□□□□ -0.31
RAB40CQ96S21 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RAB40CQ96S21 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 AC011477.6-201ENST00000604980 1927 ntBASIC13.14□□□□□ -0.31
RAB40CQ96S21 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB40CQ96S21 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
RAB40CQ96S21 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB40CQ96S21 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RAB40CQ96S21 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB40CQ96S21 AP000867.3-201ENST00000524675 377 ntBASIC13.14□□□□□ -0.31
RAB40CQ96S21 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RAB40CQ96S21 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB40CQ96S21 AL160237.2-201ENST00000556165 472 ntBASIC13.14□□□□□ -0.31
RAB40CQ96S21 MIR3180-1-201ENST00000580374 94 ntBASIC13.14□□□□□ -0.31
RAB40CQ96S21 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB40CQ96S21 MIR3180-3-201ENST00000584616 94 ntBASIC13.14□□□□□ -0.31
RAB40CQ96S21 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.14□□□□□ -0.31
RAB40CQ96S21 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.14□□□□□ -0.31
RAB40CQ96S21 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB40CQ96S21 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RAB40CQ96S21 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.14□□□□□ -0.31
RAB40CQ96S21 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.14□□□□□ -0.31
RAB40CQ96S21 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RAB40CQ96S21 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 AC104819.1-201ENST00000504587 486 ntBASIC13.13□□□□□ -0.31
RAB40CQ96S21 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 AC074051.2-201ENST00000565115 352 ntBASIC13.13□□□□□ -0.31
RAB40CQ96S21 MIR5100-201ENST00000579544 119 ntBASIC13.13□□□□□ -0.31
RAB40CQ96S21 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.13□□□□□ -0.31
RAB40CQ96S21 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.13□□□□□ -0.31
RAB40CQ96S21 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RAB40CQ96S21 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms