Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 PRSS30P-206ENST00000641773 873 ntBASIC26.02■■□□□ 1.76
IFT140Q96RY7 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
IFT140Q96RY7 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
IFT140Q96RY7 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC26.02■■□□□ 1.76
IFT140Q96RY7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
IFT140Q96RY7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
IFT140Q96RY7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.76
IFT140Q96RY7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
IFT140Q96RY7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
IFT140Q96RY7 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC26.01■■□□□ 1.75
IFT140Q96RY7 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC26.01■■□□□ 1.75
IFT140Q96RY7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
IFT140Q96RY7 SLC16A6P1-201ENST00000413214 1059 ntBASIC26.01■■□□□ 1.75
IFT140Q96RY7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
IFT140Q96RY7 AC114812.1-204ENST00000449669 728 ntBASIC26.01■■□□□ 1.75
IFT140Q96RY7 FGFR3P1-201ENST00000449999 601 ntBASIC26.01■■□□□ 1.75
IFT140Q96RY7 AC012618.1-201ENST00000461223 412 ntBASIC26.01■■□□□ 1.75
IFT140Q96RY7 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
IFT140Q96RY7 AC106794.1-201ENST00000506935 792 ntBASIC26.01■■□□□ 1.75
IFT140Q96RY7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC26.01■■□□□ 1.75
IFT140Q96RY7 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
IFT140Q96RY7 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC26.01■■□□□ 1.75
IFT140Q96RY7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
IFT140Q96RY7 PCDHB18P-201ENST00000524813 2368 ntBASIC26.01■■□□□ 1.75
IFT140Q96RY7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC26■■□□□ 1.75
IFT140Q96RY7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC26■■□□□ 1.75
IFT140Q96RY7 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC26■■□□□ 1.75
IFT140Q96RY7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC26■■□□□ 1.75
IFT140Q96RY7 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
IFT140Q96RY7 PDIA3P2-201ENST00000428073 158 ntBASIC26■■□□□ 1.75
IFT140Q96RY7 NOC2LP1-201ENST00000450578 752 ntBASIC26■■□□□ 1.75
IFT140Q96RY7 CSH2-206ENST00000560142 749 ntTSL 5 BASIC26■■□□□ 1.75
IFT140Q96RY7 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
IFT140Q96RY7 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
IFT140Q96RY7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
IFT140Q96RY7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
IFT140Q96RY7 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
IFT140Q96RY7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
IFT140Q96RY7 AC060834.1-201ENST00000443027 2032 ntBASIC26■■□□□ 1.75
IFT140Q96RY7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC26■■□□□ 1.75
IFT140Q96RY7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC26■■□□□ 1.75
IFT140Q96RY7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC26■■□□□ 1.75
IFT140Q96RY7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
IFT140Q96RY7 PKD1P6-201ENST00000343738 4769 ntBASIC26■■□□□ 1.75
IFT140Q96RY7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC26■■□□□ 1.75
IFT140Q96RY7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC26■■□□□ 1.75
IFT140Q96RY7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
IFT140Q96RY7 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
IFT140Q96RY7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
IFT140Q96RY7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
IFT140Q96RY7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
IFT140Q96RY7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC25.99■■□□□ 1.75
IFT140Q96RY7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
IFT140Q96RY7 CHMP1AP1-201ENST00000445563 662 ntBASIC25.99■■□□□ 1.75
IFT140Q96RY7 RN7SL818P-201ENST00000485099 259 ntBASIC25.99■■□□□ 1.75
IFT140Q96RY7 MARK2P5-201ENST00000507649 634 ntBASIC25.99■■□□□ 1.75
IFT140Q96RY7 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC25.99■■□□□ 1.75
IFT140Q96RY7 RN7SL725P-201ENST00000606439 259 ntBASIC25.99■■□□□ 1.75
IFT140Q96RY7 AL023803.2-201ENST00000620080 638 ntBASIC25.99■■□□□ 1.75
IFT140Q96RY7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC25.99■■□□□ 1.75
IFT140Q96RY7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
IFT140Q96RY7 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
IFT140Q96RY7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
IFT140Q96RY7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
IFT140Q96RY7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC25.99■■□□□ 1.75
IFT140Q96RY7 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC25.99■■□□□ 1.75
IFT140Q96RY7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
IFT140Q96RY7 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
IFT140Q96RY7 AC234644.1-201ENST00000406065 370 ntBASIC25.98■■□□□ 1.75
IFT140Q96RY7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 YRDCP1-201ENST00000621419 643 ntBASIC25.98■■□□□ 1.75
IFT140Q96RY7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
IFT140Q96RY7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
IFT140Q96RY7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
IFT140Q96RY7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 KRT8P29-201ENST00000420409 1371 ntBASIC25.98■■□□□ 1.75
IFT140Q96RY7 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
IFT140Q96RY7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
IFT140Q96RY7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
IFT140Q96RY7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
IFT140Q96RY7 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC25.98■■□□□ 1.75
IFT140Q96RY7 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
IFT140Q96RY7 BNIP3P13-201ENST00000599968 566 ntBASIC25.98■■□□□ 1.75
IFT140Q96RY7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
IFT140Q96RY7 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
IFT140Q96RY7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms