Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LRRC3BQ96PB8 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRC3BQ96PB8 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 INTS4P2-202ENST00000614726 2019 ntBASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 USB1-202ENST00000423271 1217 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 KRT43P-201ENST00000434019 910 ntBASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 VDAC1P7-201ENST00000462417 847 ntBASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRC3BQ96PB8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 KLF2P4-201ENST00000451959 1225 ntBASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 ENPP7P5-201ENST00000541031 1031 ntBASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 AL049840.4-201ENST00000602422 811 ntBASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.3■□□□□ 0.2
LRRC3BQ96PB8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LRRC3BQ96PB8 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.29■□□□□ 0.2
LRRC3BQ96PB8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms