Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP53Q96M91 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP53Q96M91 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CFAP53Q96M91 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP53Q96M91 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP53Q96M91 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP53Q96M91 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP53Q96M91 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP53Q96M91 FRMD6-AS1-201ENST00000617151 2229 ntBASIC21.5■■□□□ 1.03
CFAP53Q96M91 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP53Q96M91 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.5■■□□□ 1.03
CFAP53Q96M91 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC21.5■■□□□ 1.03
CFAP53Q96M91 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.5■■□□□ 1.03
CFAP53Q96M91 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.5■■□□□ 1.03
CFAP53Q96M91 SSH2-210ENST00000582084 560 ntTSL 3 BASIC21.5■■□□□ 1.03
CFAP53Q96M91 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC21.5■■□□□ 1.03
CFAP53Q96M91 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP53Q96M91 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP53Q96M91 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP53Q96M91 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP53Q96M91 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC21.5■■□□□ 1.03
CFAP53Q96M91 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC21.5■■□□□ 1.03
CFAP53Q96M91 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP53Q96M91 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP53Q96M91 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC21.5■■□□□ 1.03
CFAP53Q96M91 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CFAP53Q96M91 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC21.5■■□□□ 1.03
CFAP53Q96M91 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC21.5■■□□□ 1.03
CFAP53Q96M91 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
CFAP53Q96M91 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CFAP53Q96M91 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CFAP53Q96M91 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CFAP53Q96M91 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CFAP53Q96M91 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CFAP53Q96M91 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CFAP53Q96M91 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CFAP53Q96M91 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CFAP53Q96M91 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CFAP53Q96M91 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CFAP53Q96M91 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC21.49■■□□□ 1.03
CFAP53Q96M91 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC21.49■■□□□ 1.03
CFAP53Q96M91 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.49■■□□□ 1.03
CFAP53Q96M91 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.49■■□□□ 1.03
CFAP53Q96M91 HIST3H2BA-201ENST00000436555 524 ntBASIC21.49■■□□□ 1.03
CFAP53Q96M91 PTK7-212ENST00000476760 902 ntTSL 2 BASIC21.49■■□□□ 1.03
CFAP53Q96M91 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC21.49■■□□□ 1.03
CFAP53Q96M91 ZNF890P-202ENST00000530367 1156 ntBASIC21.49■■□□□ 1.03
CFAP53Q96M91 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.49■■□□□ 1.03
CFAP53Q96M91 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC21.49■■□□□ 1.03
CFAP53Q96M91 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CFAP53Q96M91 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC21.49■■□□□ 1.03
CFAP53Q96M91 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC21.49■■□□□ 1.03
CFAP53Q96M91 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CFAP53Q96M91 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CFAP53Q96M91 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC21.49■■□□□ 1.03
CFAP53Q96M91 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CFAP53Q96M91 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CFAP53Q96M91 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CFAP53Q96M91 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CFAP53Q96M91 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CFAP53Q96M91 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC21.48■■□□□ 1.03
CFAP53Q96M91 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CFAP53Q96M91 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CFAP53Q96M91 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CFAP53Q96M91 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CFAP53Q96M91 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CFAP53Q96M91 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CFAP53Q96M91 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CFAP53Q96M91 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CFAP53Q96M91 FAM8A3P-201ENST00000427218 844 ntBASIC21.48■■□□□ 1.03
CFAP53Q96M91 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC21.48■■□□□ 1.03
CFAP53Q96M91 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC21.48■■□□□ 1.03
CFAP53Q96M91 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CFAP53Q96M91 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CFAP53Q96M91 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CFAP53Q96M91 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CFAP53Q96M91 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
CFAP53Q96M91 OVCH1-AS1-204ENST00000641955 5529 ntBASIC21.48■■□□□ 1.03
CFAP53Q96M91 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC21.48■■□□□ 1.03
CFAP53Q96M91 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC21.48■■□□□ 1.03
CFAP53Q96M91 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CFAP53Q96M91 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC21.48■■□□□ 1.03
CFAP53Q96M91 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CFAP53Q96M91 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC21.47■■□□□ 1.03
CFAP53Q96M91 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC21.47■■□□□ 1.03
CFAP53Q96M91 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC21.47■■□□□ 1.03
CFAP53Q96M91 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC21.47■■□□□ 1.03
CFAP53Q96M91 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC21.47■■□□□ 1.03
CFAP53Q96M91 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC21.47■■□□□ 1.03
CFAP53Q96M91 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC21.47■■□□□ 1.03
CFAP53Q96M91 MRPS18AP1-201ENST00000414458 589 ntBASIC21.47■■□□□ 1.03
CFAP53Q96M91 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC21.47■■□□□ 1.03
CFAP53Q96M91 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC21.47■■□□□ 1.03
CFAP53Q96M91 UGT1A2P-201ENST00000454886 866 ntBASIC21.47■■□□□ 1.03
CFAP53Q96M91 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CFAP53Q96M91 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC21.47■■□□□ 1.03
CFAP53Q96M91 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC21.47■■□□□ 1.03
CFAP53Q96M91 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CFAP53Q96M91 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CFAP53Q96M91 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms