Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MIR6775-201ENST00000617557 69 ntBASIC18.84■□□□□ 0.61
TRIM47Q96LD4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM47Q96LD4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
TRIM47Q96LD4 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM47Q96LD4 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM47Q96LD4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
TRIM47Q96LD4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
TRIM47Q96LD4 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
TRIM47Q96LD4 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM47Q96LD4 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM47Q96LD4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
TRIM47Q96LD4 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM47Q96LD4 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM47Q96LD4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.83■□□□□ 0.61
TRIM47Q96LD4 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM47Q96LD4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRIM47Q96LD4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 KRT223P-202ENST00000449164 1292 ntBASIC18.83■□□□□ 0.6
TRIM47Q96LD4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 AP002490.2-201ENST00000524791 560 ntBASIC18.83■□□□□ 0.6
TRIM47Q96LD4 AP005482.1-201ENST00000563722 1273 ntBASIC18.83■□□□□ 0.6
TRIM47Q96LD4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TRIM47Q96LD4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 AC234783.1-201ENST00000441761 496 ntBASIC18.82■□□□□ 0.6
TRIM47Q96LD4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 TPRX2P-201ENST00000535362 881 ntBASIC18.82■□□□□ 0.6
TRIM47Q96LD4 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 AC023310.3-201ENST00000557027 670 ntBASIC18.82■□□□□ 0.6
TRIM47Q96LD4 AC100756.1-201ENST00000562736 682 ntBASIC18.82■□□□□ 0.6
TRIM47Q96LD4 AC138749.3-201ENST00000567691 622 ntBASIC18.82■□□□□ 0.6
TRIM47Q96LD4 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 AC116165.1-201ENST00000611806 668 ntBASIC18.82■□□□□ 0.6
TRIM47Q96LD4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 AL645728.1-201ENST00000366221 2101 ntBASIC18.82■□□□□ 0.6
TRIM47Q96LD4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.82■□□□□ 0.6
TRIM47Q96LD4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM47Q96LD4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRIM47Q96LD4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM47Q96LD4 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM47Q96LD4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.81■□□□□ 0.6
TRIM47Q96LD4 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
TRIM47Q96LD4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRIM47Q96LD4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms