Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT43Q96FT9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 WASH6P-202ENST00000359512 1437 ntBASIC16.69■□□□□ 0.26
IFT43Q96FT9 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
IFT43Q96FT9 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
IFT43Q96FT9 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 AC015911.4-201ENST00000588022 1070 ntBASIC16.68■□□□□ 0.26
IFT43Q96FT9 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 AC093028.1-201ENST00000622998 982 ntBASIC16.68■□□□□ 0.26
IFT43Q96FT9 AC009093.7-201ENST00000623853 1223 ntBASIC16.68■□□□□ 0.26
IFT43Q96FT9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.68■□□□□ 0.26
IFT43Q96FT9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
IFT43Q96FT9 AC126177.1-201ENST00000547829 2218 ntBASIC16.68■□□□□ 0.26
IFT43Q96FT9 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.67■□□□□ 0.26
IFT43Q96FT9 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC16.67■□□□□ 0.26
IFT43Q96FT9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
IFT43Q96FT9 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
IFT43Q96FT9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.67■□□□□ 0.26
IFT43Q96FT9 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 MIR770-201ENST00000390219 98 ntBASIC16.67■□□□□ 0.26
IFT43Q96FT9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 SPDYE11-202ENST00000450699 704 ntBASIC16.67■□□□□ 0.26
IFT43Q96FT9 SPDYE9P-201ENST00000570642 692 ntBASIC16.67■□□□□ 0.26
IFT43Q96FT9 MIR3197-201ENST00000582241 73 ntBASIC16.67■□□□□ 0.26
IFT43Q96FT9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
IFT43Q96FT9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.67■□□□□ 0.26
IFT43Q96FT9 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 SPDYE10P-202ENST00000612005 668 ntBASIC16.67■□□□□ 0.26
IFT43Q96FT9 SPDYE8P-202ENST00000612377 668 ntBASIC16.67■□□□□ 0.26
IFT43Q96FT9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.67■□□□□ 0.26
IFT43Q96FT9 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
IFT43Q96FT9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.66■□□□□ 0.26
IFT43Q96FT9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
IFT43Q96FT9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.66■□□□□ 0.26
IFT43Q96FT9 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms