Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.14■□□□□ 0.17
SIPA1Q96FS4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 AL691432.1-201ENST00000596308 1422 ntBASIC16.13■□□□□ 0.17
SIPA1Q96FS4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 AC004987.2-201ENST00000395959 1148 ntBASIC16.13■□□□□ 0.17
SIPA1Q96FS4 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 ELK1P1-201ENST00000485699 580 ntBASIC16.13■□□□□ 0.17
SIPA1Q96FS4 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 HILS1-202ENST00000545329 423 ntBASIC16.13■□□□□ 0.17
SIPA1Q96FS4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 RRP7BP-205ENST00000566851 833 ntBASIC16.13■□□□□ 0.17
SIPA1Q96FS4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SIPA1Q96FS4 AC068418.2-201ENST00000577309 3703 ntBASIC16.12■□□□□ 0.17
SIPA1Q96FS4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 AC243562.2-201ENST00000561247 970 ntBASIC16.12■□□□□ 0.17
SIPA1Q96FS4 CTBP2P3-201ENST00000585629 1255 ntBASIC16.12■□□□□ 0.17
SIPA1Q96FS4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 AL162274.1-201ENST00000617191 1098 ntBASIC16.12■□□□□ 0.17
SIPA1Q96FS4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SIPA1Q96FS4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms