Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 AC087388.1-201ENST00000571370 1112 ntBASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 MIR5100-201ENST00000579544 119 ntBASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 AC126365.1-201ENST00000578585 1514 ntBASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 MROH4P-201ENST00000431302 1578 ntBASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CKAP2Q8WWK9 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 AC067930.6-201ENST00000623257 4947 ntBASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CKAP2Q8WWK9 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 AC245100.5-201ENST00000452108 331 ntBASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 NKAPP1-205ENST00000585790 367 ntBASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 AP001269.4-201ENST00000609611 512 ntBASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CKAP2Q8WWK9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms