Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 GPX1P2-201ENST00000429271 606 ntBASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC44A1Q8WWI5 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 LINC02228-204ENST00000642115 2962 ntBASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 AC092910.1-201ENST00000482027 1129 ntBASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 RN7SL510P-201ENST00000581311 263 ntBASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 AC112693.3-201ENST00000624819 1983 ntBASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC44A1Q8WWI5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 FAM45BP-202ENST00000592932 1624 ntBASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 AC026396.1-201ENST00000419388 421 ntBASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 RHOQP3-201ENST00000437982 621 ntBASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 HCG4B-203ENST00000450128 991 ntBASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 EMBP1-201ENST00000458200 901 ntBASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 AC096734.2-201ENST00000562054 433 ntBASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SLC44A1Q8WWI5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms