Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CCER1Q8TC90 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC24.12■■□□□ 1.45
CCER1Q8TC90 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CCER1Q8TC90 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CCER1Q8TC90 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
CCER1Q8TC90 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCER1Q8TC90 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCER1Q8TC90 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CCER1Q8TC90 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCER1Q8TC90 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCER1Q8TC90 AC020658.6-201ENST00000623564 1870 ntBASIC24.11■■□□□ 1.45
CCER1Q8TC90 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CCER1Q8TC90 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC24.11■■□□□ 1.45
CCER1Q8TC90 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC24.11■■□□□ 1.45
CCER1Q8TC90 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCER1Q8TC90 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC24.11■■□□□ 1.45
CCER1Q8TC90 MRPL3P1-201ENST00000400109 1033 ntBASIC24.11■■□□□ 1.45
CCER1Q8TC90 MDH2-205ENST00000461263 648 ntTSL 2 BASIC24.11■■□□□ 1.45
CCER1Q8TC90 PPIE-208ENST00000470213 927 ntTSL 3 BASIC24.11■■□□□ 1.45
CCER1Q8TC90 KRT18P34-201ENST00000488218 1270 ntBASIC24.11■■□□□ 1.45
CCER1Q8TC90 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CCER1Q8TC90 AC109635.5-201ENST00000533593 962 ntBASIC24.11■■□□□ 1.45
CCER1Q8TC90 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
CCER1Q8TC90 AL078644.1-201ENST00000609881 752 ntBASIC24.11■■□□□ 1.45
CCER1Q8TC90 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCER1Q8TC90 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CCER1Q8TC90 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC24.11■■□□□ 1.45
CCER1Q8TC90 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC24.11■■□□□ 1.45
CCER1Q8TC90 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCER1Q8TC90 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCER1Q8TC90 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC24.11■■□□□ 1.45
CCER1Q8TC90 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CCER1Q8TC90 AC073439.1-201ENST00000624121 1774 ntBASIC24.11■■□□□ 1.45
CCER1Q8TC90 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC24.11■■□□□ 1.45
CCER1Q8TC90 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC24.1■■□□□ 1.45
CCER1Q8TC90 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
CCER1Q8TC90 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCER1Q8TC90 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CCER1Q8TC90 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CCER1Q8TC90 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CCER1Q8TC90 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC24.1■■□□□ 1.45
CCER1Q8TC90 AC092474.2-201ENST00000424288 719 ntBASIC24.1■■□□□ 1.45
CCER1Q8TC90 RHOQP3-201ENST00000437982 621 ntBASIC24.1■■□□□ 1.45
CCER1Q8TC90 THTPA-204ENST00000554970 569 ntTSL 4 BASIC24.1■■□□□ 1.45
CCER1Q8TC90 THTPA-206ENST00000556015 535 ntTSL 3 BASIC24.1■■□□□ 1.45
CCER1Q8TC90 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC24.1■■□□□ 1.45
CCER1Q8TC90 AC096734.2-201ENST00000562054 433 ntBASIC24.1■■□□□ 1.45
CCER1Q8TC90 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC24.1■■□□□ 1.45
CCER1Q8TC90 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC24.1■■□□□ 1.45
CCER1Q8TC90 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
CCER1Q8TC90 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC24.1■■□□□ 1.45
CCER1Q8TC90 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCER1Q8TC90 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC24.1■■□□□ 1.45
CCER1Q8TC90 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCER1Q8TC90 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CCER1Q8TC90 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CCER1Q8TC90 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCER1Q8TC90 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCER1Q8TC90 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCER1Q8TC90 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC24.09■■□□□ 1.45
CCER1Q8TC90 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CCER1Q8TC90 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCER1Q8TC90 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCER1Q8TC90 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCER1Q8TC90 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCER1Q8TC90 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC24.09■■□□□ 1.45
CCER1Q8TC90 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC24.09■■□□□ 1.45
CCER1Q8TC90 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC24.09■■□□□ 1.45
CCER1Q8TC90 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC24.09■■□□□ 1.45
CCER1Q8TC90 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCER1Q8TC90 AC004870.1-201ENST00000315132 882 ntBASIC24.09■■□□□ 1.45
CCER1Q8TC90 FALEC-201ENST00000416894 566 ntTSL 3 BASIC24.09■■□□□ 1.45
CCER1Q8TC90 HS6ST1P1-201ENST00000481504 1234 ntBASIC24.09■■□□□ 1.45
CCER1Q8TC90 RNA5SP419-201ENST00000515908 135 ntBASIC24.09■■□□□ 1.45
CCER1Q8TC90 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC24.09■■□□□ 1.45
CCER1Q8TC90 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC24.09■■□□□ 1.45
CCER1Q8TC90 LITAF-211ENST00000572255 516 ntTSL 4 BASIC24.09■■□□□ 1.45
CCER1Q8TC90 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
CCER1Q8TC90 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC24.09■■□□□ 1.45
CCER1Q8TC90 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC24.09■■□□□ 1.45
CCER1Q8TC90 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCER1Q8TC90 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC24.09■■□□□ 1.45
CCER1Q8TC90 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC24.09■■□□□ 1.45
CCER1Q8TC90 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCER1Q8TC90 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCER1Q8TC90 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCER1Q8TC90 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
CCER1Q8TC90 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCER1Q8TC90 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCER1Q8TC90 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CCER1Q8TC90 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC24.09■■□□□ 1.45
CCER1Q8TC90 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCER1Q8TC90 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC24.08■■□□□ 1.45
CCER1Q8TC90 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC24.08■■□□□ 1.45
CCER1Q8TC90 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC24.08■■□□□ 1.45
CCER1Q8TC90 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCER1Q8TC90 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCER1Q8TC90 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCER1Q8TC90 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC24.08■■□□□ 1.45
CCER1Q8TC90 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms