Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 KRT17P7-201ENST00000451704 1104 ntBASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 AL139010.1-201ENST00000454878 894 ntBASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 CHCHD2P3-201ENST00000603038 451 ntBASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 AC005622.1-201ENST00000636801 1703 ntBASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHKBP1Q8TBC3 OR6D1P-202ENST00000641007 5290 ntBASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 AC093004.1-201ENST00000508850 424 ntBASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 GGT3P-204ENST00000453783 1664 ntBASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHKBP1Q8TBC3 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 SDHAP3-202ENST00000515467 728 ntBASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 WASH4P-201ENST00000564273 1246 ntBASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 AC004461.2-201ENST00000629517 803 ntBASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 AL109936.8-201ENST00000641772 604 ntBASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SHKBP1Q8TBC3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms