Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.02□□□□□ -0.17
BEST4Q8NFU0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC14.02□□□□□ -0.17
BEST4Q8NFU0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC14.02□□□□□ -0.17
BEST4Q8NFU0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
BEST4Q8NFU0 AL353135.1-201ENST00000606729 504 ntBASIC14.02□□□□□ -0.17
BEST4Q8NFU0 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.02□□□□□ -0.17
BEST4Q8NFU0 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.02□□□□□ -0.17
BEST4Q8NFU0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
BEST4Q8NFU0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.02□□□□□ -0.17
BEST4Q8NFU0 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BEST4Q8NFU0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.02□□□□□ -0.17
BEST4Q8NFU0 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 PCGF3-213ENST00000620529 1899 ntBASIC14.01□□□□□ -0.17
BEST4Q8NFU0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 TMBIM7P-203ENST00000641617 1718 ntBASIC14.01□□□□□ -0.17
BEST4Q8NFU0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 LINC00552-201ENST00000625151 2579 ntBASIC14.01□□□□□ -0.17
BEST4Q8NFU0 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 LINC01144-201ENST00000626198 1710 ntBASIC14.01□□□□□ -0.17
BEST4Q8NFU0 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.01□□□□□ -0.17
BEST4Q8NFU0 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST4Q8NFU0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14□□□□□ -0.17
BEST4Q8NFU0 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14□□□□□ -0.17
BEST4Q8NFU0 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST4Q8NFU0 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
BEST4Q8NFU0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14□□□□□ -0.17
BEST4Q8NFU0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST4Q8NFU0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14□□□□□ -0.17
BEST4Q8NFU0 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST4Q8NFU0 API5-202ENST00000420461 2009 ntTSL 2 BASIC14□□□□□ -0.17
BEST4Q8NFU0 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14□□□□□ -0.17
BEST4Q8NFU0 C8orf49-201ENST00000525043 1968 ntBASIC14□□□□□ -0.17
BEST4Q8NFU0 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST4Q8NFU0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14□□□□□ -0.17
BEST4Q8NFU0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST4Q8NFU0 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST4Q8NFU0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST4Q8NFU0 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
BEST4Q8NFU0 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14□□□□□ -0.17
BEST4Q8NFU0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
BEST4Q8NFU0 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
BEST4Q8NFU0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
BEST4Q8NFU0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14□□□□□ -0.17
BEST4Q8NFU0 DRAXINP1-201ENST00000437611 948 ntBASIC14□□□□□ -0.17
BEST4Q8NFU0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC14□□□□□ -0.17
BEST4Q8NFU0 ABCD1P5-201ENST00000445663 754 ntBASIC14□□□□□ -0.17
BEST4Q8NFU0 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
BEST4Q8NFU0 DUX4L26-201ENST00000489078 1255 ntBASIC14□□□□□ -0.17
BEST4Q8NFU0 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14□□□□□ -0.17
BEST4Q8NFU0 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14□□□□□ -0.17
BEST4Q8NFU0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC14□□□□□ -0.17
BEST4Q8NFU0 MPDU1-223ENST00000582151 728 ntBASIC14□□□□□ -0.17
BEST4Q8NFU0 SIGLEC29P-201ENST00000599873 1114 ntBASIC14□□□□□ -0.17
BEST4Q8NFU0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms