Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NUP43Q8NFH3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 MIR346-201ENST00000362234 95 ntBASIC15.11■□□□□ 0.01
NUP43Q8NFH3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 DNAJB3-201ENST00000446806 729 ntBASIC15.11■□□□□ 0.01
NUP43Q8NFH3 CEND1P1-201ENST00000451006 455 ntBASIC15.11■□□□□ 0.01
NUP43Q8NFH3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 KRT8P23-201ENST00000560090 1207 ntBASIC15.11■□□□□ 0.01
NUP43Q8NFH3 LINC01225-203ENST00000563550 1244 ntBASIC15.11■□□□□ 0.01
NUP43Q8NFH3 AC005829.1-201ENST00000570002 483 ntBASIC15.11■□□□□ 0.01
NUP43Q8NFH3 AC061975.2-201ENST00000581722 295 ntBASIC15.11■□□□□ 0.01
NUP43Q8NFH3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 AP001282.1-201ENST00000531301 1499 ntBASIC15.11■□□□□ 0.01
NUP43Q8NFH3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 ELL2P1-201ENST00000413990 1906 ntBASIC15.11■□□□□ 0.01
NUP43Q8NFH3 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 UXT-AS1-201ENST00000590504 1525 ntBASIC15.11■□□□□ 0.01
NUP43Q8NFH3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.11■□□□□ 0.01
NUP43Q8NFH3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 AL592309.1-201ENST00000443127 649 ntBASIC15.1■□□□□ 0.01
NUP43Q8NFH3 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.1■□□□□ 0.01
NUP43Q8NFH3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NUP43Q8NFH3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms