Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
LRTM2Q8N967 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 SNX18-202ENST00000343017 3140 ntBASIC13.2□□□□□ -0.3
LRTM2Q8N967 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.2□□□□□ -0.3
LRTM2Q8N967 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 RNU1-129P-201ENST00000384064 167 ntBASIC13.2□□□□□ -0.3
LRTM2Q8N967 PMS2P4-201ENST00000412466 1052 ntBASIC13.2□□□□□ -0.3
LRTM2Q8N967 ELK2BP-201ENST00000415014 1224 ntBASIC13.2□□□□□ -0.3
LRTM2Q8N967 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 U1.21-201ENST00000580816 167 ntBASIC13.2□□□□□ -0.3
LRTM2Q8N967 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.2□□□□□ -0.3
LRTM2Q8N967 MTDHP4-201ENST00000600287 670 ntBASIC13.2□□□□□ -0.3
LRTM2Q8N967 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.2□□□□□ -0.3
LRTM2Q8N967 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
LRTM2Q8N967 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.19□□□□□ -0.3
LRTM2Q8N967 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LRTM2Q8N967 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
LRTM2Q8N967 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC13.19□□□□□ -0.3
LRTM2Q8N967 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.19□□□□□ -0.3
LRTM2Q8N967 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRTM2Q8N967 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.19□□□□□ -0.3
LRTM2Q8N967 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.19□□□□□ -0.3
LRTM2Q8N967 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.19□□□□□ -0.3
LRTM2Q8N967 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.19□□□□□ -0.3
LRTM2Q8N967 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC13.19□□□□□ -0.3
LRTM2Q8N967 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LRTM2Q8N967 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LRTM2Q8N967 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LRTM2Q8N967 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LRTM2Q8N967 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
LRTM2Q8N967 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.18□□□□□ -0.3
LRTM2Q8N967 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRTM2Q8N967 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LRTM2Q8N967 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms