Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SCN4BQ8IWT1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 AL691432.1-201ENST00000596308 1422 ntBASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCN4BQ8IWT1 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 AC006449.6-201ENST00000612330 2296 ntBASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 AC245100.5-201ENST00000452108 331 ntBASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 AC190387.1-201ENST00000551683 408 ntBASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 AC243562.2-201ENST00000561247 970 ntBASIC16.96■□□□□ 0.31
SCN4BQ8IWT1 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms