Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CROCCP3Q8IVE0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 AC006277.1-201ENST00000624348 1610 ntBASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CROCCP3Q8IVE0 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 KRT8P49-201ENST00000604166 1432 ntBASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 NAPSB-206ENST00000562112 1266 ntBASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 AC142381.4-202ENST00000563973 229 ntBASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 AC099521.3-201ENST00000624251 2938 ntBASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CROCCP3Q8IVE0 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms