Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
COL23A1Q86Y22 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 IGF1-203ENST00000392904 761 ntTSL 5 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 HLA-DQB2-229ENST00000411527 1059 ntBASIC19.92■□□□□ 0.78
COL23A1Q86Y22 AC136604.1-201ENST00000418535 575 ntBASIC19.92■□□□□ 0.78
COL23A1Q86Y22 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 MIR7845-201ENST00000618396 99 ntBASIC19.92■□□□□ 0.78
COL23A1Q86Y22 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 PP12613-201ENST00000424958 2230 ntBASIC19.92■□□□□ 0.78
COL23A1Q86Y22 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
COL23A1Q86Y22 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 AC020763.4-201ENST00000623414 4170 ntBASIC19.91■□□□□ 0.78
COL23A1Q86Y22 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 AC016700.1-201ENST00000429424 312 ntBASIC19.91■□□□□ 0.78
COL23A1Q86Y22 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 KRT18P43-201ENST00000469825 1281 ntBASIC19.91■□□□□ 0.78
COL23A1Q86Y22 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 AC126915.1-201ENST00000522847 1038 ntBASIC19.91■□□□□ 0.78
COL23A1Q86Y22 HNRNPUP1-201ENST00000554987 333 ntBASIC19.91■□□□□ 0.78
COL23A1Q86Y22 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 ETV2-208ENST00000621247 941 ntTSL 5 BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL23A1Q86Y22 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 MPV17-204ENST00000399052 749 ntTSL 4 BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 POM121L10P-201ENST00000436994 1285 ntBASIC19.9■□□□□ 0.78
COL23A1Q86Y22 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 RN7SL720P-201ENST00000488178 304 ntBASIC19.9■□□□□ 0.78
COL23A1Q86Y22 FTLP10-202ENST00000505798 471 ntBASIC19.9■□□□□ 0.78
COL23A1Q86Y22 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 AC245884.6-201ENST00000515672 1067 ntBASIC19.9■□□□□ 0.78
COL23A1Q86Y22 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC19.9■□□□□ 0.78
COL23A1Q86Y22 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms