Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 AL353726.2-201ENST00000623259 884 ntBASIC13.33□□□□□ -0.28
CSMD2Q7Z408 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC13.33□□□□□ -0.28
CSMD2Q7Z408 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD2Q7Z408 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CSMD2Q7Z408 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.32□□□□□ -0.28
CSMD2Q7Z408 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 CEP164P1-201ENST00000455142 418 ntBASIC13.32□□□□□ -0.28
CSMD2Q7Z408 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 DRD5P1-201ENST00000456605 1438 ntBASIC13.32□□□□□ -0.28
CSMD2Q7Z408 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 MIR769-201ENST00000390225 118 ntBASIC13.32□□□□□ -0.28
CSMD2Q7Z408 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 COX5BP1-201ENST00000507622 393 ntBASIC13.32□□□□□ -0.28
CSMD2Q7Z408 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 AL139384.1-201ENST00000612143 3047 ntBASIC13.32□□□□□ -0.28
CSMD2Q7Z408 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 AC125604.1-201ENST00000496255 707 ntBASIC13.32□□□□□ -0.28
CSMD2Q7Z408 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC13.32□□□□□ -0.28
CSMD2Q7Z408 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 AC141586.5-201ENST00000624546 2050 ntBASIC13.31□□□□□ -0.28
CSMD2Q7Z408 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.31□□□□□ -0.28
CSMD2Q7Z408 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 HLA-A-202ENST00000376806 1854 ntBASIC13.31□□□□□ -0.28
CSMD2Q7Z408 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 AC134407.2-201ENST00000625089 1978 ntBASIC13.31□□□□□ -0.28
CSMD2Q7Z408 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 AC009486.1-201ENST00000569860 813 ntBASIC13.31□□□□□ -0.28
CSMD2Q7Z408 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CSMD2Q7Z408 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms