Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 HOMER2P2-201ENST00000451621 847 ntBASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 BX284668.4-201ENST00000453917 508 ntBASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 RPSAP36-202ENST00000494591 1261 ntBASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 ADM-202ENST00000524948 584 ntTSL 2 BASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 AC105129.2-201ENST00000559536 390 ntBASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 AL138709.1-201ENST00000614840 1693 ntBASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
KRT28Q7Z3Y7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 CYP2AB1P-202ENST00000454440 1456 ntBASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 PGGT1BP2-201ENST00000398621 1028 ntBASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 REEP1-202ENST00000453231 940 ntTSL 2 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 AC091804.1-201ENST00000486888 567 ntBASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 HIST2H2BC-201ENST00000498492 580 ntBASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 AC132938.4-201ENST00000623835 848 ntBASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 AC015967.2-201ENST00000624092 234 ntBASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 AC006435.4-201ENST00000625037 234 ntBASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 AL356737.1-201ENST00000634391 234 ntBASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 AC134407.2-201ENST00000625089 1978 ntBASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC21.48■■□□□ 1.03
KRT28Q7Z3Y7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 AC139713.2-201ENST00000641328 2723 ntBASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 MTX1P1-201ENST00000440904 838 ntBASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 AP005019.2-201ENST00000615104 511 ntBASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 AC105020.1-201ENST00000435356 2205 ntBASIC21.47■■□□□ 1.03
KRT28Q7Z3Y7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC21.46■■□□□ 1.03
KRT28Q7Z3Y7 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms