Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC20.34■□□□□ 0.85
PTF1AQ7RTS3 MIR3907-201ENST00000579424 151 ntBASIC20.34■□□□□ 0.85
PTF1AQ7RTS3 RN7SL574P-201ENST00000581512 297 ntBASIC20.34■□□□□ 0.85
PTF1AQ7RTS3 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC20.34■□□□□ 0.85
PTF1AQ7RTS3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
PTF1AQ7RTS3 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC20.34■□□□□ 0.85
PTF1AQ7RTS3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
PTF1AQ7RTS3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTF1AQ7RTS3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTF1AQ7RTS3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
PTF1AQ7RTS3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC20.34■□□□□ 0.85
PTF1AQ7RTS3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTF1AQ7RTS3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTF1AQ7RTS3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
PTF1AQ7RTS3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
PTF1AQ7RTS3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.34■□□□□ 0.85
PTF1AQ7RTS3 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 AL592424.1-201ENST00000563624 1536 ntBASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 AC069218.1-201ENST00000435269 762 ntBASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 CNN2P10-201ENST00000443067 918 ntBASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 AP005019.2-201ENST00000615104 511 ntBASIC20.33■□□□□ 0.85
PTF1AQ7RTS3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
PTF1AQ7RTS3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTF1AQ7RTS3 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.33■□□□□ 0.84
PTF1AQ7RTS3 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PTF1AQ7RTS3 RNF216P1-203ENST00000404404 2427 ntBASIC20.33■□□□□ 0.84
PTF1AQ7RTS3 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
PTF1AQ7RTS3 AC139713.2-201ENST00000641328 2723 ntBASIC20.33■□□□□ 0.84
PTF1AQ7RTS3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 POM121L10P-201ENST00000436994 1285 ntBASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 GAPDHP40-201ENST00000505218 1006 ntBASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 NAT9-222ENST00000583476 583 ntTSL 3 BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 AP003419.4-201ENST00000616071 517 ntBASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 AC079336.7-201ENST00000623428 1078 ntBASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PTF1AQ7RTS3 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 FOS-202ENST00000535987 1402 ntTSL 2 BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 KRT18P43-201ENST00000469825 1281 ntBASIC20.31■□□□□ 0.84
PTF1AQ7RTS3 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms