Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCNI2Q6ZMN8 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CCNI2Q6ZMN8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.18■□□□□ 0.34
CCNI2Q6ZMN8 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.18■□□□□ 0.34
CCNI2Q6ZMN8 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC17.18■□□□□ 0.34
CCNI2Q6ZMN8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
CCNI2Q6ZMN8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CCNI2Q6ZMN8 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCNI2Q6ZMN8 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCNI2Q6ZMN8 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCNI2Q6ZMN8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CCNI2Q6ZMN8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 COX20P2-201ENST00000452636 358 ntBASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 MIR1199-201ENST00000621445 119 ntBASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 AC005593.1-201ENST00000624894 515 ntBASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CCNI2Q6ZMN8 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 AC023908.3-201ENST00000564211 3047 ntBASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 LINC00982-205ENST00000420957 435 ntBASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 AL020989.1-201ENST00000422979 469 ntBASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 ALG1L5P-201ENST00000482043 771 ntBASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 AC106028.4-201ENST00000614509 607 ntBASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 AC092919.2-201ENST00000623631 1645 ntBASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.16■□□□□ 0.34
CCNI2Q6ZMN8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.15■□□□□ 0.34
CCNI2Q6ZMN8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms