Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 AP003680.1-201ENST00000598970 3660 ntBASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 SPDYE11-202ENST00000450699 704 ntBASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 RN7SL589P-201ENST00000481268 310 ntBASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 AP000842.3-202ENST00000569238 1080 ntBASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 SPDYE9P-201ENST00000570642 692 ntBASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 MTDHP5-201ENST00000598980 586 ntBASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 SPDYE10P-202ENST00000612005 668 ntBASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 SPDYE8P-202ENST00000612377 668 ntBASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.16
ZNF549Q6P9A3 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.02■□□□□ 0.15
ZNF549Q6P9A3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
ZNF549Q6P9A3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.15
ZNF549Q6P9A3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF549Q6P9A3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
ZNF549Q6P9A3 AC134407.2-201ENST00000625089 1978 ntBASIC16.02■□□□□ 0.15
ZNF549Q6P9A3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF549Q6P9A3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.02■□□□□ 0.15
ZNF549Q6P9A3 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF549Q6P9A3 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ZNF549Q6P9A3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 MKNK2P1-201ENST00000437526 628 ntBASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
ZNF549Q6P9A3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF549Q6P9A3 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF549Q6P9A3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16■□□□□ 0.15
ZNF549Q6P9A3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
ZNF549Q6P9A3 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF549Q6P9A3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF549Q6P9A3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16■□□□□ 0.15
ZNF549Q6P9A3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF549Q6P9A3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16■□□□□ 0.15
ZNF549Q6P9A3 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF549Q6P9A3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16■□□□□ 0.15
ZNF549Q6P9A3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16■□□□□ 0.15
ZNF549Q6P9A3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16■□□□□ 0.15
ZNF549Q6P9A3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF549Q6P9A3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF549Q6P9A3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF549Q6P9A3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF549Q6P9A3 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
ZNF549Q6P9A3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
ZNF549Q6P9A3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms